Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 AL390719.2-201ENST00000606993 987 ntBASIC13.99□□□□□ -0.17
TRBV12-3P01733 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 KRT89P-201ENST00000620027 1478 ntBASIC13.99□□□□□ -0.17
TRBV12-3P01733 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 IER3-202ENST00000376377 1350 ntBASIC13.98□□□□□ -0.17
TRBV12-3P01733 HTR7P1-202ENST00000624664 4411 ntBASIC13.98□□□□□ -0.17
TRBV12-3P01733 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 AC011498.5-201ENST00000592027 486 ntBASIC13.98□□□□□ -0.17
TRBV12-3P01733 AC008687.5-201ENST00000593746 558 ntBASIC13.98□□□□□ -0.17
TRBV12-3P01733 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 GPR32P1-201ENST00000601788 811 ntBASIC13.98□□□□□ -0.17
TRBV12-3P01733 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV12-3P01733 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV12-3P01733 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.97□□□□□ -0.17
TRBV12-3P01733 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV12-3P01733 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV12-3P01733 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.97□□□□□ -0.17
TRBV12-3P01733 AL353692.3-201ENST00000407031 1396 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms