Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 MIR662-201ENST00000384847 95 ntBASIC16.13■□□□□ 0.17
TRAF3IP2O43734 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 KRT18P48-201ENST00000434763 852 ntBASIC16.13■□□□□ 0.17
TRAF3IP2O43734 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 SPDYE13P-201ENST00000445314 798 ntBASIC16.13■□□□□ 0.17
TRAF3IP2O43734 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 VENTXP5-201ENST00000523979 775 ntBASIC16.13■□□□□ 0.17
TRAF3IP2O43734 LINC01238-205ENST00000567549 1107 ntBASIC16.13■□□□□ 0.17
TRAF3IP2O43734 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.13■□□□□ 0.17
TRAF3IP2O43734 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 AC008764.6-201ENST00000595909 2069 ntBASIC16.13■□□□□ 0.17
TRAF3IP2O43734 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 NOC2LP2-201ENST00000407594 1944 ntBASIC16.13■□□□□ 0.17
TRAF3IP2O43734 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP2O43734 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 LINC00602-201ENST00000629776 2065 ntBASIC16.12■□□□□ 0.17
TRAF3IP2O43734 LINC01311-201ENST00000565162 1445 ntBASIC16.12■□□□□ 0.17
TRAF3IP2O43734 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.12■□□□□ 0.17
TRAF3IP2O43734 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 DUTP2-201ENST00000519164 463 ntBASIC16.12■□□□□ 0.17
TRAF3IP2O43734 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP2O43734 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms