Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
ARFGEF1Q9Y6D6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.01■■■□□ 2.56
ARFGEF1Q9Y6D6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
ARFGEF1Q9Y6D6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
ARFGEF1Q9Y6D6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
ARFGEF1Q9Y6D6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.01■■■□□ 2.55
ARFGEF1Q9Y6D6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
ARFGEF1Q9Y6D6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31■■■□□ 2.55
ARFGEF1Q9Y6D6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.99■■■□□ 2.55
ARFGEF1Q9Y6D6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.99■■■□□ 2.55
ARFGEF1Q9Y6D6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.99■■■□□ 2.55
ARFGEF1Q9Y6D6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.99■■■□□ 2.55
ARFGEF1Q9Y6D6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.98■■■□□ 2.55
ARFGEF1Q9Y6D6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ARFGEF1Q9Y6D6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
ARFGEF1Q9Y6D6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ARFGEF1Q9Y6D6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ARFGEF1Q9Y6D6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.97■■■□□ 2.55
ARFGEF1Q9Y6D6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.96■■■□□ 2.55
ARFGEF1Q9Y6D6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ARFGEF1Q9Y6D6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ARFGEF1Q9Y6D6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.96■■■□□ 2.55
ARFGEF1Q9Y6D6 AL359258.2-201ENST00000564063 1566 ntBASIC30.96■■■□□ 2.55
ARFGEF1Q9Y6D6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
ARFGEF1Q9Y6D6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ARFGEF1Q9Y6D6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ARFGEF1Q9Y6D6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
ARFGEF1Q9Y6D6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ARFGEF1Q9Y6D6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ARFGEF1Q9Y6D6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
ARFGEF1Q9Y6D6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ARFGEF1Q9Y6D6 AL031848.2-201ENST00000607670 837 ntBASIC30.94■■■□□ 2.54
ARFGEF1Q9Y6D6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.93■■■□□ 2.54
ARFGEF1Q9Y6D6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
ARFGEF1Q9Y6D6 MIR3960-201ENST00000583311 91 ntBASIC30.92■■■□□ 2.54
ARFGEF1Q9Y6D6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.92■■■□□ 2.54
ARFGEF1Q9Y6D6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.92■■■□□ 2.54
ARFGEF1Q9Y6D6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.92■■■□□ 2.54
ARFGEF1Q9Y6D6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
ARFGEF1Q9Y6D6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ARFGEF1Q9Y6D6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ARFGEF1Q9Y6D6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ARFGEF1Q9Y6D6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.9■■■□□ 2.54
ARFGEF1Q9Y6D6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.9■■■□□ 2.54
ARFGEF1Q9Y6D6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
ARFGEF1Q9Y6D6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
ARFGEF1Q9Y6D6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.89■■■□□ 2.53
ARFGEF1Q9Y6D6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
ARFGEF1Q9Y6D6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.89■■■□□ 2.53
ARFGEF1Q9Y6D6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.88■■■□□ 2.53
ARFGEF1Q9Y6D6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.88■■■□□ 2.53
ARFGEF1Q9Y6D6 Z92544.1-202ENST00000571933 1220 ntBASIC30.88■■■□□ 2.53
ARFGEF1Q9Y6D6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.87■■■□□ 2.53
ARFGEF1Q9Y6D6 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.87■■■□□ 2.53
ARFGEF1Q9Y6D6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
ARFGEF1Q9Y6D6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.87■■■□□ 2.53
ARFGEF1Q9Y6D6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
ARFGEF1Q9Y6D6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
ARFGEF1Q9Y6D6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ARFGEF1Q9Y6D6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
ARFGEF1Q9Y6D6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ARFGEF1Q9Y6D6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.84■■■□□ 2.53
ARFGEF1Q9Y6D6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.84■■■□□ 2.53
ARFGEF1Q9Y6D6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ARFGEF1Q9Y6D6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
ARFGEF1Q9Y6D6 AC008406.3-201ENST00000620001 1374 ntBASIC30.83■■■□□ 2.53
ARFGEF1Q9Y6D6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ARFGEF1Q9Y6D6 MIR638-201ENST00000385237 100 ntBASIC30.82■■■□□ 2.52
ARFGEF1Q9Y6D6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
ARFGEF1Q9Y6D6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.82■■■□□ 2.52
ARFGEF1Q9Y6D6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.81■■■□□ 2.52
ARFGEF1Q9Y6D6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.81■■■□□ 2.52
ARFGEF1Q9Y6D6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
ARFGEF1Q9Y6D6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.81■■■□□ 2.52
ARFGEF1Q9Y6D6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
ARFGEF1Q9Y6D6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ARFGEF1Q9Y6D6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ARFGEF1Q9Y6D6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
ARFGEF1Q9Y6D6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ARFGEF1Q9Y6D6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
ARFGEF1Q9Y6D6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
ARFGEF1Q9Y6D6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
ARFGEF1Q9Y6D6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
ARFGEF1Q9Y6D6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.79■■■□□ 2.52
ARFGEF1Q9Y6D6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.78■■■□□ 2.52
ARFGEF1Q9Y6D6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
ARFGEF1Q9Y6D6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.77■■■□□ 2.52
ARFGEF1Q9Y6D6 AC239859.2-201ENST00000444165 318 ntBASIC30.77■■■□□ 2.52
ARFGEF1Q9Y6D6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
ARFGEF1Q9Y6D6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ARFGEF1Q9Y6D6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
ARFGEF1Q9Y6D6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC30.76■■■□□ 2.51
ARFGEF1Q9Y6D6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.76■■■□□ 2.51
ARFGEF1Q9Y6D6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ARFGEF1Q9Y6D6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
ARFGEF1Q9Y6D6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.75■■■□□ 2.51
ARFGEF1Q9Y6D6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.75■■■□□ 2.51
ARFGEF1Q9Y6D6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ARFGEF1Q9Y6D6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
ARFGEF1Q9Y6D6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.74■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms