Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 AL359258.2-201ENST00000564063 1566 ntBASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA11Q9Y5I1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHA11Q9Y5I1 AC103834.1-201ENST00000520383 144 ntBASIC27.16■■□□□ 1.94
PCDHA11Q9Y5I1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA11Q9Y5I1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA11Q9Y5I1 SPCS2P3-201ENST00000500401 656 ntBASIC27.15■■□□□ 1.94
PCDHA11Q9Y5I1 RAP2CP1-202ENST00000605179 643 ntBASIC27.15■■□□□ 1.94
PCDHA11Q9Y5I1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDHA11Q9Y5I1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA11Q9Y5I1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.14■■□□□ 1.94
PCDHA11Q9Y5I1 AC093536.1-201ENST00000569153 554 ntBASIC27.14■■□□□ 1.94
PCDHA11Q9Y5I1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHA11Q9Y5I1 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.13■■□□□ 1.93
PCDHA11Q9Y5I1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.13■■□□□ 1.93
PCDHA11Q9Y5I1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHA11Q9Y5I1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA11Q9Y5I1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA11Q9Y5I1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA11Q9Y5I1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA11Q9Y5I1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA11Q9Y5I1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA11Q9Y5I1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.12■■□□□ 1.93
PCDHA11Q9Y5I1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
PCDHA11Q9Y5I1 MIR6765-201ENST00000614092 87 ntBASIC27.12■■□□□ 1.93
PCDHA11Q9Y5I1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA11Q9Y5I1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
PCDHA11Q9Y5I1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
PCDHA11Q9Y5I1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.11■■□□□ 1.93
PCDHA11Q9Y5I1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHA11Q9Y5I1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHA11Q9Y5I1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
PCDHA11Q9Y5I1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.11■■□□□ 1.93
PCDHA11Q9Y5I1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHA11Q9Y5I1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.11■■□□□ 1.93
PCDHA11Q9Y5I1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHA11Q9Y5I1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.1■■□□□ 1.93
PCDHA11Q9Y5I1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.1■■□□□ 1.93
PCDHA11Q9Y5I1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
PCDHA11Q9Y5I1 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.1■■□□□ 1.93
PCDHA11Q9Y5I1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHA11Q9Y5I1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
PCDHA11Q9Y5I1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHA11Q9Y5I1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
PCDHA11Q9Y5I1 ST7-AS1-201ENST00000456775 1889 ntBASIC27.08■■□□□ 1.93
PCDHA11Q9Y5I1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA11Q9Y5I1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC27.08■■□□□ 1.93
PCDHA11Q9Y5I1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA11Q9Y5I1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA11Q9Y5I1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA11Q9Y5I1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.08■■□□□ 1.93
PCDHA11Q9Y5I1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA11Q9Y5I1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHA11Q9Y5I1 PVT1_1.1-201ENST00000615125 194 ntBASIC27.07■■□□□ 1.92
PCDHA11Q9Y5I1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
PCDHA11Q9Y5I1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHA11Q9Y5I1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
PCDHA11Q9Y5I1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHA11Q9Y5I1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.06■■□□□ 1.92
PCDHA11Q9Y5I1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.06■■□□□ 1.92
PCDHA11Q9Y5I1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.06■■□□□ 1.92
PCDHA11Q9Y5I1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.05■■□□□ 1.92
PCDHA11Q9Y5I1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.05■■□□□ 1.92
PCDHA11Q9Y5I1 MIR4508-201ENST00000584178 70 ntBASIC27.05■■□□□ 1.92
PCDHA11Q9Y5I1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.05■■□□□ 1.92
PCDHA11Q9Y5I1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
PCDHA11Q9Y5I1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA11Q9Y5I1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.04■■□□□ 1.92
PCDHA11Q9Y5I1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.04■■□□□ 1.92
PCDHA11Q9Y5I1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA11Q9Y5I1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA11Q9Y5I1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
PCDHA11Q9Y5I1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA11Q9Y5I1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHA11Q9Y5I1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.04■■□□□ 1.92
PCDHA11Q9Y5I1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHA11Q9Y5I1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHA11Q9Y5I1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHA11Q9Y5I1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDHA11Q9Y5I1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.03■■□□□ 1.92
PCDHA11Q9Y5I1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHA11Q9Y5I1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHA11Q9Y5I1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.02■■□□□ 1.92
PCDHA11Q9Y5I1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHA11Q9Y5I1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHA11Q9Y5I1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.01■■□□□ 1.92
PCDHA11Q9Y5I1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHA11Q9Y5I1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHA11Q9Y5I1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.01■■□□□ 1.91
PCDHA11Q9Y5I1 AC018755.3-202ENST00000596210 929 ntBASIC27.01■■□□□ 1.91
PCDHA11Q9Y5I1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.01■■□□□ 1.91
PCDHA11Q9Y5I1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
PCDHA11Q9Y5I1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27■■□□□ 1.91
PCDHA11Q9Y5I1 AL356441.2-201ENST00000443009 864 ntBASIC27■■□□□ 1.91
PCDHA11Q9Y5I1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27■■□□□ 1.91
PCDHA11Q9Y5I1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHA11Q9Y5I1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms