Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.68■■■□□ 2.18
TRIM17Q9Y577 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
TRIM17Q9Y577 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.68■■■□□ 2.18
TRIM17Q9Y577 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TRIM17Q9Y577 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.67■■■□□ 2.18
TRIM17Q9Y577 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TRIM17Q9Y577 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TRIM17Q9Y577 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TRIM17Q9Y577 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TRIM17Q9Y577 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.65■■■□□ 2.18
TRIM17Q9Y577 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
TRIM17Q9Y577 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
TRIM17Q9Y577 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
TRIM17Q9Y577 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.65■■■□□ 2.18
TRIM17Q9Y577 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.65■■■□□ 2.18
TRIM17Q9Y577 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
TRIM17Q9Y577 PEMT-206ENST00000435340 960 ntTSL 5 BASIC28.64■■■□□ 2.18
TRIM17Q9Y577 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
TRIM17Q9Y577 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRIM17Q9Y577 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRIM17Q9Y577 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
TRIM17Q9Y577 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
TRIM17Q9Y577 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.63■■■□□ 2.17
TRIM17Q9Y577 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.63■■■□□ 2.17
TRIM17Q9Y577 GRAMD4P7-201ENST00000578182 1232 ntBASIC28.63■■■□□ 2.17
TRIM17Q9Y577 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.62■■■□□ 2.17
TRIM17Q9Y577 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
TRIM17Q9Y577 MIR3960-201ENST00000583311 91 ntBASIC28.62■■■□□ 2.17
TRIM17Q9Y577 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TRIM17Q9Y577 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRIM17Q9Y577 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
TRIM17Q9Y577 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRIM17Q9Y577 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
TRIM17Q9Y577 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.59■■■□□ 2.17
TRIM17Q9Y577 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.59■■■□□ 2.17
TRIM17Q9Y577 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.59■■■□□ 2.17
TRIM17Q9Y577 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.59■■■□□ 2.17
TRIM17Q9Y577 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.59■■■□□ 2.17
TRIM17Q9Y577 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.59■■■□□ 2.17
TRIM17Q9Y577 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.59■■■□□ 2.17
TRIM17Q9Y577 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TRIM17Q9Y577 AL135925.1-201ENST00000605920 1701 ntBASIC28.58■■■□□ 2.17
TRIM17Q9Y577 MTX2-204ENST00000443241 799 ntTSL 3 BASIC28.58■■■□□ 2.17
TRIM17Q9Y577 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.58■■■□□ 2.17
TRIM17Q9Y577 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
TRIM17Q9Y577 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
TRIM17Q9Y577 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.57■■■□□ 2.16
TRIM17Q9Y577 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC28.57■■■□□ 2.16
TRIM17Q9Y577 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
TRIM17Q9Y577 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TRIM17Q9Y577 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.57■■■□□ 2.16
TRIM17Q9Y577 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
TRIM17Q9Y577 MIR638-201ENST00000385237 100 ntBASIC28.56■■■□□ 2.16
TRIM17Q9Y577 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TRIM17Q9Y577 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TRIM17Q9Y577 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TRIM17Q9Y577 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
TRIM17Q9Y577 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRIM17Q9Y577 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC28.54■■■□□ 2.16
TRIM17Q9Y577 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.54■■■□□ 2.16
TRIM17Q9Y577 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.54■■■□□ 2.16
TRIM17Q9Y577 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TRIM17Q9Y577 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.54■■■□□ 2.16
TRIM17Q9Y577 Z92544.1-202ENST00000571933 1220 ntBASIC28.53■■■□□ 2.16
TRIM17Q9Y577 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
TRIM17Q9Y577 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.5■■■□□ 2.15
TRIM17Q9Y577 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.49■■■□□ 2.15
TRIM17Q9Y577 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.49■■■□□ 2.15
TRIM17Q9Y577 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRIM17Q9Y577 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TRIM17Q9Y577 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.48■■■□□ 2.15
TRIM17Q9Y577 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TRIM17Q9Y577 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
TRIM17Q9Y577 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.48■■■□□ 2.15
TRIM17Q9Y577 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
TRIM17Q9Y577 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.47■■■□□ 2.15
TRIM17Q9Y577 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TRIM17Q9Y577 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
TRIM17Q9Y577 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.44■■■□□ 2.14
TRIM17Q9Y577 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
TRIM17Q9Y577 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
TRIM17Q9Y577 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
TRIM17Q9Y577 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TRIM17Q9Y577 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TRIM17Q9Y577 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TRIM17Q9Y577 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TRIM17Q9Y577 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
TRIM17Q9Y577 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TRIM17Q9Y577 AC019171.1-201ENST00000601251 1056 ntBASIC28.41■■■□□ 2.14
TRIM17Q9Y577 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.41■■■□□ 2.14
TRIM17Q9Y577 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM17Q9Y577 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM17Q9Y577 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC28.4■■■□□ 2.14
TRIM17Q9Y577 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM17Q9Y577 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM17Q9Y577 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC28.39■■■□□ 2.14
TRIM17Q9Y577 AL139246.5-201ENST00000606645 996 ntBASIC28.39■■■□□ 2.14
TRIM17Q9Y577 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.39■■■□□ 2.14
TRIM17Q9Y577 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM17Q9Y577 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms