Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSM4Q9Y4Z0 AC020928.2-201ENST00000588717 2197 ntBASIC19.72■□□□□ 0.75
LSM4Q9Y4Z0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.71■□□□□ 0.75
LSM4Q9Y4Z0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LSM4Q9Y4Z0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LSM4Q9Y4Z0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSM4Q9Y4Z0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM4Q9Y4Z0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM4Q9Y4Z0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM4Q9Y4Z0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM4Q9Y4Z0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LSM4Q9Y4Z0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.69■□□□□ 0.74
LSM4Q9Y4Z0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM4Q9Y4Z0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM4Q9Y4Z0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LSM4Q9Y4Z0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LSM4Q9Y4Z0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LSM4Q9Y4Z0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM4Q9Y4Z0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.69■□□□□ 0.74
LSM4Q9Y4Z0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.69■□□□□ 0.74
LSM4Q9Y4Z0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LSM4Q9Y4Z0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM4Q9Y4Z0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.68■□□□□ 0.74
LSM4Q9Y4Z0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LSM4Q9Y4Z0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
LSM4Q9Y4Z0 WHAMMP2-203ENST00000563942 1603 ntBASIC19.68■□□□□ 0.74
LSM4Q9Y4Z0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSM4Q9Y4Z0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM4Q9Y4Z0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.67■□□□□ 0.74
LSM4Q9Y4Z0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM4Q9Y4Z0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM4Q9Y4Z0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM4Q9Y4Z0 DUSP8P4-201ENST00000399538 1761 ntBASIC19.66■□□□□ 0.74
LSM4Q9Y4Z0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM4Q9Y4Z0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM4Q9Y4Z0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.65■□□□□ 0.74
LSM4Q9Y4Z0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM4Q9Y4Z0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM4Q9Y4Z0 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.65■□□□□ 0.74
LSM4Q9Y4Z0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.65■□□□□ 0.74
LSM4Q9Y4Z0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSM4Q9Y4Z0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.65■□□□□ 0.74
LSM4Q9Y4Z0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LSM4Q9Y4Z0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM4Q9Y4Z0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM4Q9Y4Z0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.64■□□□□ 0.74
LSM4Q9Y4Z0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LSM4Q9Y4Z0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 DUX4L13-201ENST00000554103 1267 ntBASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 DUX4L15-201ENST00000611059 1267 ntBASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 DUX4L23-201ENST00000615195 1269 ntBASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 DUX4L24-201ENST00000617576 1269 ntBASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 DUX4L22-201ENST00000618238 1269 ntBASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 DUX4L20-201ENST00000619712 1269 ntBASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 DUX4L21-201ENST00000622058 1269 ntBASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 DUX4L10-201ENST00000622460 1267 ntBASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 DUX4L25-201ENST00000624915 1269 ntBASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.63■□□□□ 0.73
LSM4Q9Y4Z0 AC092803.2-201ENST00000564287 1899 ntBASIC19.62■□□□□ 0.73
LSM4Q9Y4Z0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LSM4Q9Y4Z0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LSM4Q9Y4Z0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LSM4Q9Y4Z0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LSM4Q9Y4Z0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LSM4Q9Y4Z0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSM4Q9Y4Z0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
LSM4Q9Y4Z0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSM4Q9Y4Z0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM4Q9Y4Z0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM4Q9Y4Z0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM4Q9Y4Z0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.61■□□□□ 0.73
LSM4Q9Y4Z0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM4Q9Y4Z0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LSM4Q9Y4Z0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.6■□□□□ 0.73
LSM4Q9Y4Z0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.6■□□□□ 0.73
LSM4Q9Y4Z0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSM4Q9Y4Z0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSM4Q9Y4Z0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSM4Q9Y4Z0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSM4Q9Y4Z0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LSM4Q9Y4Z0 LINC00273-201ENST00000539813 1452 ntBASIC19.6■□□□□ 0.73
LSM4Q9Y4Z0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LSM4Q9Y4Z0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LSM4Q9Y4Z0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.59■□□□□ 0.73
LSM4Q9Y4Z0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LSM4Q9Y4Z0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM4Q9Y4Z0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LSM4Q9Y4Z0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LSM4Q9Y4Z0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LSM4Q9Y4Z0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LSM4Q9Y4Z0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.58■□□□□ 0.72
LSM4Q9Y4Z0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.58■□□□□ 0.72
LSM4Q9Y4Z0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSM4Q9Y4Z0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSM4Q9Y4Z0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms