Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.92■■□□□ 1.9
GCNT4Q9P109 WHAMMP3-201ENST00000611636 1609 ntBASIC26.91■■□□□ 1.9
GCNT4Q9P109 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
GCNT4Q9P109 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
GCNT4Q9P109 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
GCNT4Q9P109 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
GCNT4Q9P109 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
GCNT4Q9P109 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
GCNT4Q9P109 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
GCNT4Q9P109 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
GCNT4Q9P109 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
GCNT4Q9P109 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.89■■□□□ 1.9
GCNT4Q9P109 HSD17B1P1-201ENST00000590052 955 ntBASIC26.89■■□□□ 1.9
GCNT4Q9P109 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
GCNT4Q9P109 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.88■■□□□ 1.89
GCNT4Q9P109 AC008813.1-201ENST00000536597 885 ntBASIC26.88■■□□□ 1.89
GCNT4Q9P109 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
GCNT4Q9P109 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
GCNT4Q9P109 AP004609.3-201ENST00000610705 1884 ntBASIC26.87■■□□□ 1.89
GCNT4Q9P109 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
GCNT4Q9P109 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
GCNT4Q9P109 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.87■■□□□ 1.89
GCNT4Q9P109 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.87■■□□□ 1.89
GCNT4Q9P109 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
GCNT4Q9P109 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
GCNT4Q9P109 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
GCNT4Q9P109 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
GCNT4Q9P109 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
GCNT4Q9P109 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
GCNT4Q9P109 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
GCNT4Q9P109 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.85■■□□□ 1.89
GCNT4Q9P109 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
GCNT4Q9P109 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
GCNT4Q9P109 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.85■■□□□ 1.89
GCNT4Q9P109 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
GCNT4Q9P109 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
GCNT4Q9P109 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
GCNT4Q9P109 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
GCNT4Q9P109 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.84■■□□□ 1.89
GCNT4Q9P109 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
GCNT4Q9P109 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
GCNT4Q9P109 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
GCNT4Q9P109 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.84■■□□□ 1.89
GCNT4Q9P109 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.83■■□□□ 1.89
GCNT4Q9P109 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.83■■□□□ 1.89
GCNT4Q9P109 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
GCNT4Q9P109 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.82■■□□□ 1.88
GCNT4Q9P109 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
GCNT4Q9P109 MIR219A2-201ENST00000608502 1504 ntBASIC26.82■■□□□ 1.88
GCNT4Q9P109 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
GCNT4Q9P109 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.82■■□□□ 1.88
GCNT4Q9P109 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.82■■□□□ 1.88
GCNT4Q9P109 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
GCNT4Q9P109 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.82■■□□□ 1.88
GCNT4Q9P109 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
GCNT4Q9P109 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.81■■□□□ 1.88
GCNT4Q9P109 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
GCNT4Q9P109 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
GCNT4Q9P109 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
GCNT4Q9P109 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.81■■□□□ 1.88
GCNT4Q9P109 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
GCNT4Q9P109 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
GCNT4Q9P109 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
GCNT4Q9P109 AC148477.6-201ENST00000623746 465 ntBASIC26.81■■□□□ 1.88
GCNT4Q9P109 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
GCNT4Q9P109 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
GCNT4Q9P109 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
GCNT4Q9P109 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.81■■□□□ 1.88
GCNT4Q9P109 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.8■■□□□ 1.88
GCNT4Q9P109 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
GCNT4Q9P109 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.8■■□□□ 1.88
GCNT4Q9P109 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
GCNT4Q9P109 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
GCNT4Q9P109 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
GCNT4Q9P109 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.79■■□□□ 1.88
GCNT4Q9P109 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.79■■□□□ 1.88
GCNT4Q9P109 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.79■■□□□ 1.88
GCNT4Q9P109 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
GCNT4Q9P109 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
GCNT4Q9P109 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.78■■□□□ 1.88
GCNT4Q9P109 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.78■■□□□ 1.88
GCNT4Q9P109 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
GCNT4Q9P109 AC142472.1-201ENST00000612013 1741 ntBASIC26.78■■□□□ 1.88
GCNT4Q9P109 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
GCNT4Q9P109 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
GCNT4Q9P109 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
GCNT4Q9P109 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
GCNT4Q9P109 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.77■■□□□ 1.88
GCNT4Q9P109 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
GCNT4Q9P109 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.76■■□□□ 1.87
GCNT4Q9P109 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
GCNT4Q9P109 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
GCNT4Q9P109 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
GCNT4Q9P109 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
GCNT4Q9P109 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.75■■□□□ 1.87
GCNT4Q9P109 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
GCNT4Q9P109 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.75■■□□□ 1.87
GCNT4Q9P109 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
GCNT4Q9P109 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.74■■□□□ 1.87
GCNT4Q9P109 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms