Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 WHAMMP3-201ENST00000611636 1609 ntBASIC20.62■□□□□ 0.89
KCNIP1Q9NZI2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNIP1Q9NZI2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNIP1Q9NZI2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
KCNIP1Q9NZI2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNIP1Q9NZI2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNIP1Q9NZI2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
KCNIP1Q9NZI2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNIP1Q9NZI2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNIP1Q9NZI2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNIP1Q9NZI2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNIP1Q9NZI2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KCNIP1Q9NZI2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
KCNIP1Q9NZI2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNIP1Q9NZI2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNIP1Q9NZI2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
KCNIP1Q9NZI2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
KCNIP1Q9NZI2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
KCNIP1Q9NZI2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
KCNIP1Q9NZI2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNIP1Q9NZI2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KCNIP1Q9NZI2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.56■□□□□ 0.88
KCNIP1Q9NZI2 AC091060.1-201ENST00000623524 1766 ntBASIC20.56■□□□□ 0.88
KCNIP1Q9NZI2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.56■□□□□ 0.88
KCNIP1Q9NZI2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNIP1Q9NZI2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNIP1Q9NZI2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 DUX4L13-201ENST00000554103 1267 ntBASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 DUX4L15-201ENST00000611059 1267 ntBASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 DUX4L23-201ENST00000615195 1269 ntBASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 DUX4L24-201ENST00000617576 1269 ntBASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 DUX4L22-201ENST00000618238 1269 ntBASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 DUX4L20-201ENST00000619712 1269 ntBASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 DUX4L21-201ENST00000622058 1269 ntBASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 DUX4L10-201ENST00000622460 1267 ntBASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 DUX4L25-201ENST00000624915 1269 ntBASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 AC142472.1-201ENST00000612013 1741 ntBASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNIP1Q9NZI2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNIP1Q9NZI2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNIP1Q9NZI2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KCNIP1Q9NZI2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.54■□□□□ 0.88
KCNIP1Q9NZI2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNIP1Q9NZI2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNIP1Q9NZI2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNIP1Q9NZI2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNIP1Q9NZI2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNIP1Q9NZI2 AC008813.1-201ENST00000536597 885 ntBASIC20.53■□□□□ 0.88
KCNIP1Q9NZI2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.53■□□□□ 0.88
KCNIP1Q9NZI2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNIP1Q9NZI2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNIP1Q9NZI2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNIP1Q9NZI2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.52■□□□□ 0.88
KCNIP1Q9NZI2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
KCNIP1Q9NZI2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.52■□□□□ 0.87
KCNIP1Q9NZI2 AC145676.1-201ENST00000514988 2004 ntBASIC20.51■□□□□ 0.87
KCNIP1Q9NZI2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNIP1Q9NZI2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNIP1Q9NZI2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.51■□□□□ 0.87
KCNIP1Q9NZI2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KCNIP1Q9NZI2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.5■□□□□ 0.87
KCNIP1Q9NZI2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNIP1Q9NZI2 DUX4L11-201ENST00000611504 1267 ntBASIC20.5■□□□□ 0.87
KCNIP1Q9NZI2 DUX4L12-201ENST00000614593 1267 ntBASIC20.5■□□□□ 0.87
KCNIP1Q9NZI2 DUX4L14-201ENST00000621227 1267 ntBASIC20.5■□□□□ 0.87
KCNIP1Q9NZI2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KCNIP1Q9NZI2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.5■□□□□ 0.87
KCNIP1Q9NZI2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNIP1Q9NZI2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNIP1Q9NZI2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNIP1Q9NZI2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KCNIP1Q9NZI2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNIP1Q9NZI2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNIP1Q9NZI2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KCNIP1Q9NZI2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNIP1Q9NZI2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
KCNIP1Q9NZI2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNIP1Q9NZI2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNIP1Q9NZI2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
KCNIP1Q9NZI2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNIP1Q9NZI2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNIP1Q9NZI2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNIP1Q9NZI2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNIP1Q9NZI2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNIP1Q9NZI2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNIP1Q9NZI2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.47■□□□□ 0.87
KCNIP1Q9NZI2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNIP1Q9NZI2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KCNIP1Q9NZI2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
KCNIP1Q9NZI2 AC092803.2-201ENST00000564287 1899 ntBASIC20.47■□□□□ 0.87
KCNIP1Q9NZI2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNIP1Q9NZI2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNIP1Q9NZI2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNIP1Q9NZI2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.46■□□□□ 0.87
KCNIP1Q9NZI2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNIP1Q9NZI2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
KCNIP1Q9NZI2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
KCNIP1Q9NZI2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms