Protein–RNA interactions for Protein: Q9NVV0

TMEM38B, Trimeric intracellular cation channel type B, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38BQ9NVV0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM38BQ9NVV0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM38BQ9NVV0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM38BQ9NVV0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM38BQ9NVV0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
TMEM38BQ9NVV0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TMEM38BQ9NVV0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TMEM38BQ9NVV0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.79■■□□□ 1.08
TMEM38BQ9NVV0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM38BQ9NVV0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM38BQ9NVV0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
TMEM38BQ9NVV0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TMEM38BQ9NVV0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM38BQ9NVV0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TMEM38BQ9NVV0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM38BQ9NVV0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM38BQ9NVV0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM38BQ9NVV0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.78■■□□□ 1.08
TMEM38BQ9NVV0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM38BQ9NVV0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
TMEM38BQ9NVV0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM38BQ9NVV0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM38BQ9NVV0 MIR4449-201ENST00000578365 66 ntBASIC21.77■■□□□ 1.08
TMEM38BQ9NVV0 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.77■■□□□ 1.08
TMEM38BQ9NVV0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM38BQ9NVV0 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.77■■□□□ 1.08
TMEM38BQ9NVV0 AL359258.2-201ENST00000564063 1566 ntBASIC21.77■■□□□ 1.08
TMEM38BQ9NVV0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
TMEM38BQ9NVV0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM38BQ9NVV0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM38BQ9NVV0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.76■■□□□ 1.07
TMEM38BQ9NVV0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM38BQ9NVV0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEM38BQ9NVV0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
TMEM38BQ9NVV0 AC126177.7-201ENST00000547904 679 ntBASIC21.75■■□□□ 1.07
TMEM38BQ9NVV0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM38BQ9NVV0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TMEM38BQ9NVV0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM38BQ9NVV0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM38BQ9NVV0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM38BQ9NVV0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM38BQ9NVV0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TMEM38BQ9NVV0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM38BQ9NVV0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM38BQ9NVV0 AP004609.3-201ENST00000610705 1884 ntBASIC21.73■■□□□ 1.07
TMEM38BQ9NVV0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.72■■□□□ 1.07
TMEM38BQ9NVV0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM38BQ9NVV0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM38BQ9NVV0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.72■■□□□ 1.07
TMEM38BQ9NVV0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.72■■□□□ 1.07
TMEM38BQ9NVV0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM38BQ9NVV0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM38BQ9NVV0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM38BQ9NVV0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM38BQ9NVV0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.71■■□□□ 1.07
TMEM38BQ9NVV0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM38BQ9NVV0 AC142472.1-201ENST00000612013 1741 ntBASIC21.71■■□□□ 1.07
TMEM38BQ9NVV0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM38BQ9NVV0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM38BQ9NVV0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.7■■□□□ 1.06
TMEM38BQ9NVV0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
TMEM38BQ9NVV0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM38BQ9NVV0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM38BQ9NVV0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEM38BQ9NVV0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM38BQ9NVV0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM38BQ9NVV0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM38BQ9NVV0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM38BQ9NVV0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM38BQ9NVV0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM38BQ9NVV0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM38BQ9NVV0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.68■■□□□ 1.06
TMEM38BQ9NVV0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM38BQ9NVV0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM38BQ9NVV0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.67■■□□□ 1.06
TMEM38BQ9NVV0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.66■■□□□ 1.06
TMEM38BQ9NVV0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM38BQ9NVV0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.66■■□□□ 1.06
TMEM38BQ9NVV0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM38BQ9NVV0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM38BQ9NVV0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM38BQ9NVV0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM38BQ9NVV0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM38BQ9NVV0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TMEM38BQ9NVV0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TMEM38BQ9NVV0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM38BQ9NVV0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM38BQ9NVV0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TMEM38BQ9NVV0 AC060814.1-201ENST00000554326 538 ntBASIC21.64■■□□□ 1.05
TMEM38BQ9NVV0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM38BQ9NVV0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM38BQ9NVV0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.64■■□□□ 1.05
TMEM38BQ9NVV0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM38BQ9NVV0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM38BQ9NVV0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM38BQ9NVV0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM38BQ9NVV0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.63■■□□□ 1.05
TMEM38BQ9NVV0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.63■■□□□ 1.05
TMEM38BQ9NVV0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM38BQ9NVV0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms