Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COMMD4Q9H0A8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COMMD4Q9H0A8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.67■■□□□ 1.06
COMMD4Q9H0A8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COMMD4Q9H0A8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
COMMD4Q9H0A8 AP006261.1-201ENST00000584783 668 ntBASIC21.67■■□□□ 1.06
COMMD4Q9H0A8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.67■■□□□ 1.06
COMMD4Q9H0A8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.66■■□□□ 1.06
COMMD4Q9H0A8 AC142472.1-201ENST00000612013 1741 ntBASIC21.66■■□□□ 1.06
COMMD4Q9H0A8 AC110285.7-201ENST00000624417 1536 ntBASIC21.66■■□□□ 1.06
COMMD4Q9H0A8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COMMD4Q9H0A8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD4Q9H0A8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
COMMD4Q9H0A8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.66■■□□□ 1.06
COMMD4Q9H0A8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD4Q9H0A8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
COMMD4Q9H0A8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD4Q9H0A8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD4Q9H0A8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.65■■□□□ 1.06
COMMD4Q9H0A8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
COMMD4Q9H0A8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
COMMD4Q9H0A8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COMMD4Q9H0A8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.64■■□□□ 1.05
COMMD4Q9H0A8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.64■■□□□ 1.05
COMMD4Q9H0A8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COMMD4Q9H0A8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD4Q9H0A8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.63■■□□□ 1.05
COMMD4Q9H0A8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD4Q9H0A8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD4Q9H0A8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD4Q9H0A8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD4Q9H0A8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD4Q9H0A8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
COMMD4Q9H0A8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
COMMD4Q9H0A8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.62■■□□□ 1.05
COMMD4Q9H0A8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD4Q9H0A8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
COMMD4Q9H0A8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD4Q9H0A8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD4Q9H0A8 WHAMMP3-201ENST00000611636 1609 ntBASIC21.62■■□□□ 1.05
COMMD4Q9H0A8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD4Q9H0A8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.61■■□□□ 1.05
COMMD4Q9H0A8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD4Q9H0A8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD4Q9H0A8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD4Q9H0A8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD4Q9H0A8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD4Q9H0A8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD4Q9H0A8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD4Q9H0A8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.6■■□□□ 1.05
COMMD4Q9H0A8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD4Q9H0A8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COMMD4Q9H0A8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COMMD4Q9H0A8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COMMD4Q9H0A8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COMMD4Q9H0A8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.59■■□□□ 1.05
COMMD4Q9H0A8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COMMD4Q9H0A8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COMMD4Q9H0A8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COMMD4Q9H0A8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COMMD4Q9H0A8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COMMD4Q9H0A8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COMMD4Q9H0A8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD4Q9H0A8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD4Q9H0A8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD4Q9H0A8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD4Q9H0A8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.57■■□□□ 1.04
COMMD4Q9H0A8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD4Q9H0A8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD4Q9H0A8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD4Q9H0A8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD4Q9H0A8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD4Q9H0A8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
COMMD4Q9H0A8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.56■■□□□ 1.04
COMMD4Q9H0A8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD4Q9H0A8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
COMMD4Q9H0A8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COMMD4Q9H0A8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COMMD4Q9H0A8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.55■■□□□ 1.04
COMMD4Q9H0A8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COMMD4Q9H0A8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COMMD4Q9H0A8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COMMD4Q9H0A8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
COMMD4Q9H0A8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.54■■□□□ 1.04
COMMD4Q9H0A8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.54■■□□□ 1.04
COMMD4Q9H0A8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.53■■□□□ 1.04
COMMD4Q9H0A8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.53■■□□□ 1.04
COMMD4Q9H0A8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD4Q9H0A8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD4Q9H0A8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.53■■□□□ 1.04
COMMD4Q9H0A8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD4Q9H0A8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD4Q9H0A8 AC087741.3-201ENST00000624270 1347 ntBASIC21.53■■□□□ 1.04
COMMD4Q9H0A8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.53■■□□□ 1.04
COMMD4Q9H0A8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
COMMD4Q9H0A8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COMMD4Q9H0A8 AL162393.1-201ENST00000437852 946 ntBASIC21.52■■□□□ 1.04
COMMD4Q9H0A8 AC044849.2-201ENST00000606596 710 ntBASIC21.52■■□□□ 1.04
COMMD4Q9H0A8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COMMD4Q9H0A8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms