Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
LSG1Q9H089 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
LSG1Q9H089 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
LSG1Q9H089 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
LSG1Q9H089 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
LSG1Q9H089 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
LSG1Q9H089 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
LSG1Q9H089 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
LSG1Q9H089 AC016575.1-201ENST00000607026 382 ntBASIC29.73■■■□□ 2.35
LSG1Q9H089 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
LSG1Q9H089 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
LSG1Q9H089 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
LSG1Q9H089 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
LSG1Q9H089 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.72■■■□□ 2.35
LSG1Q9H089 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
LSG1Q9H089 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.71■■■□□ 2.35
LSG1Q9H089 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
LSG1Q9H089 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.71■■■□□ 2.35
LSG1Q9H089 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
LSG1Q9H089 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.71■■■□□ 2.35
LSG1Q9H089 AC142472.1-201ENST00000612013 1741 ntBASIC29.71■■■□□ 2.35
LSG1Q9H089 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.7■■■□□ 2.34
LSG1Q9H089 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
LSG1Q9H089 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.7■■■□□ 2.34
LSG1Q9H089 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.7■■■□□ 2.34
LSG1Q9H089 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
LSG1Q9H089 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.69■■■□□ 2.34
LSG1Q9H089 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
LSG1Q9H089 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.69■■■□□ 2.34
LSG1Q9H089 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
LSG1Q9H089 MIR7108-201ENST00000614319 87 ntBASIC29.69■■■□□ 2.34
LSG1Q9H089 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
LSG1Q9H089 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.69■■■□□ 2.34
LSG1Q9H089 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
LSG1Q9H089 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
LSG1Q9H089 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
LSG1Q9H089 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.67■■■□□ 2.34
LSG1Q9H089 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.67■■■□□ 2.34
LSG1Q9H089 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
LSG1Q9H089 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.66■■■□□ 2.34
LSG1Q9H089 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
LSG1Q9H089 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.66■■■□□ 2.34
LSG1Q9H089 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
LSG1Q9H089 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
LSG1Q9H089 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
LSG1Q9H089 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.64■■■□□ 2.34
LSG1Q9H089 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
LSG1Q9H089 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.64■■■□□ 2.34
LSG1Q9H089 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
LSG1Q9H089 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.64■■■□□ 2.34
LSG1Q9H089 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
LSG1Q9H089 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
LSG1Q9H089 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
LSG1Q9H089 AC091060.1-201ENST00000623524 1766 ntBASIC29.63■■■□□ 2.33
LSG1Q9H089 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.63■■■□□ 2.33
LSG1Q9H089 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
LSG1Q9H089 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.62■■■□□ 2.33
LSG1Q9H089 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
LSG1Q9H089 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
LSG1Q9H089 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
LSG1Q9H089 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
LSG1Q9H089 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.61■■■□□ 2.33
LSG1Q9H089 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.61■■■□□ 2.33
LSG1Q9H089 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
LSG1Q9H089 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
LSG1Q9H089 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.6■■■□□ 2.33
LSG1Q9H089 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
LSG1Q9H089 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.59■■■□□ 2.33
LSG1Q9H089 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.59■■■□□ 2.33
LSG1Q9H089 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.59■■■□□ 2.33
LSG1Q9H089 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
LSG1Q9H089 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
LSG1Q9H089 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
LSG1Q9H089 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.58■■■□□ 2.33
LSG1Q9H089 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.58■■■□□ 2.33
LSG1Q9H089 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
LSG1Q9H089 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
LSG1Q9H089 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.57■■■□□ 2.32
LSG1Q9H089 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.57■■■□□ 2.32
LSG1Q9H089 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
LSG1Q9H089 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.56■■■□□ 2.32
LSG1Q9H089 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
LSG1Q9H089 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.55■■■□□ 2.32
LSG1Q9H089 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
LSG1Q9H089 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
LSG1Q9H089 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
LSG1Q9H089 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
LSG1Q9H089 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.54■■■□□ 2.32
LSG1Q9H089 AL359258.2-201ENST00000564063 1566 ntBASIC29.54■■■□□ 2.32
LSG1Q9H089 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.54■■■□□ 2.32
LSG1Q9H089 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
LSG1Q9H089 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
LSG1Q9H089 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LSG1Q9H089 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
LSG1Q9H089 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.53■■■□□ 2.32
LSG1Q9H089 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LSG1Q9H089 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
LSG1Q9H089 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
LSG1Q9H089 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.52■■■□□ 2.32
LSG1Q9H089 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.52■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms