Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK3BQ9BT76 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK3BQ9BT76 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.06■□□□□ 0.32
UPK3BQ9BT76 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK3BQ9BT76 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.06■□□□□ 0.32
UPK3BQ9BT76 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK3BQ9BT76 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK3BQ9BT76 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPK3BQ9BT76 AL157400.5-201ENST00000507624 621 ntBASIC17.05■□□□□ 0.32
UPK3BQ9BT76 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK3BQ9BT76 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK3BQ9BT76 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
UPK3BQ9BT76 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UPK3BQ9BT76 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.04■□□□□ 0.32
UPK3BQ9BT76 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPK3BQ9BT76 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.04■□□□□ 0.32
UPK3BQ9BT76 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK3BQ9BT76 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK3BQ9BT76 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.04■□□□□ 0.32
UPK3BQ9BT76 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK3BQ9BT76 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.03■□□□□ 0.32
UPK3BQ9BT76 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
UPK3BQ9BT76 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK3BQ9BT76 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK3BQ9BT76 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.02■□□□□ 0.32
UPK3BQ9BT76 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
UPK3BQ9BT76 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.02■□□□□ 0.32
UPK3BQ9BT76 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.02■□□□□ 0.32
UPK3BQ9BT76 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK3BQ9BT76 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
UPK3BQ9BT76 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPK3BQ9BT76 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.01■□□□□ 0.31
UPK3BQ9BT76 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK3BQ9BT76 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK3BQ9BT76 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK3BQ9BT76 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK3BQ9BT76 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK3BQ9BT76 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UPK3BQ9BT76 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK3BQ9BT76 DRD5P2-201ENST00000421395 2012 ntBASIC17■□□□□ 0.31
UPK3BQ9BT76 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17■□□□□ 0.31
UPK3BQ9BT76 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK3BQ9BT76 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK3BQ9BT76 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC16.99■□□□□ 0.31
UPK3BQ9BT76 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK3BQ9BT76 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK3BQ9BT76 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.99■□□□□ 0.31
UPK3BQ9BT76 NTF6A-201ENST00000591175 560 ntBASIC16.99■□□□□ 0.31
UPK3BQ9BT76 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK3BQ9BT76 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK3BQ9BT76 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC16.99■□□□□ 0.31
UPK3BQ9BT76 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK3BQ9BT76 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC16.98■□□□□ 0.31
UPK3BQ9BT76 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK3BQ9BT76 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.98■□□□□ 0.31
UPK3BQ9BT76 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UPK3BQ9BT76 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK3BQ9BT76 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK3BQ9BT76 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.97■□□□□ 0.31
UPK3BQ9BT76 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UPK3BQ9BT76 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
UPK3BQ9BT76 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC16.97■□□□□ 0.31
UPK3BQ9BT76 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.96■□□□□ 0.31
UPK3BQ9BT76 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK3BQ9BT76 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.96■□□□□ 0.31
UPK3BQ9BT76 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
UPK3BQ9BT76 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.96■□□□□ 0.31
UPK3BQ9BT76 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.96■□□□□ 0.31
UPK3BQ9BT76 AC025884.2-201ENST00000553429 711 ntBASIC16.96■□□□□ 0.31
UPK3BQ9BT76 AC007029.1-201ENST00000604183 313 ntBASIC16.96■□□□□ 0.31
UPK3BQ9BT76 SMPD5-203ENST00000639008 1464 ntBASIC16.96■□□□□ 0.31
UPK3BQ9BT76 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPK3BQ9BT76 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.96■□□□□ 0.31
UPK3BQ9BT76 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPK3BQ9BT76 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK3BQ9BT76 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
UPK3BQ9BT76 WHAMMP3-201ENST00000611636 1609 ntBASIC16.96■□□□□ 0.3
UPK3BQ9BT76 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK3BQ9BT76 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK3BQ9BT76 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
UPK3BQ9BT76 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.95■□□□□ 0.3
UPK3BQ9BT76 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK3BQ9BT76 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK3BQ9BT76 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK3BQ9BT76 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK3BQ9BT76 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK3BQ9BT76 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.93■□□□□ 0.3
UPK3BQ9BT76 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.93■□□□□ 0.3
UPK3BQ9BT76 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.93■□□□□ 0.3
UPK3BQ9BT76 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.93■□□□□ 0.3
UPK3BQ9BT76 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK3BQ9BT76 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.92■□□□□ 0.3
UPK3BQ9BT76 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UPK3BQ9BT76 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
UPK3BQ9BT76 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK3BQ9BT76 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK3BQ9BT76 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK3BQ9BT76 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK3BQ9BT76 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK3BQ9BT76 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms