Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.78■■□□□ 1.4
CMKLR1Q99788 AC093536.1-201ENST00000569153 554 ntBASIC23.78■■□□□ 1.4
CMKLR1Q99788 MIR3960-201ENST00000583311 91 ntBASIC23.78■■□□□ 1.4
CMKLR1Q99788 AP002414.2-202ENST00000590929 1450 ntBASIC23.78■■□□□ 1.4
CMKLR1Q99788 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.77■■□□□ 1.4
CMKLR1Q99788 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.77■■□□□ 1.4
CMKLR1Q99788 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.77■■□□□ 1.4
CMKLR1Q99788 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.77■■□□□ 1.4
CMKLR1Q99788 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.77■■□□□ 1.4
CMKLR1Q99788 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CMKLR1Q99788 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CMKLR1Q99788 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.76■■□□□ 1.39
CMKLR1Q99788 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CMKLR1Q99788 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CMKLR1Q99788 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CMKLR1Q99788 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CMKLR1Q99788 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.75■■□□□ 1.39
CMKLR1Q99788 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.75■■□□□ 1.39
CMKLR1Q99788 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.74■■□□□ 1.39
CMKLR1Q99788 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.74■■□□□ 1.39
CMKLR1Q99788 BHLHE23-202ENST00000612929 1109 ntBASIC23.74■■□□□ 1.39
CMKLR1Q99788 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CMKLR1Q99788 DUX4L9-201ENST00000449051 1259 ntBASIC23.73■■□□□ 1.39
CMKLR1Q99788 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.73■■□□□ 1.39
CMKLR1Q99788 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CMKLR1Q99788 RAP2CP1-202ENST00000605179 643 ntBASIC23.73■■□□□ 1.39
CMKLR1Q99788 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
CMKLR1Q99788 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.72■■□□□ 1.39
CMKLR1Q99788 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CMKLR1Q99788 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CMKLR1Q99788 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CMKLR1Q99788 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CMKLR1Q99788 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.71■■□□□ 1.39
CMKLR1Q99788 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.71■■□□□ 1.39
CMKLR1Q99788 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CMKLR1Q99788 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CMKLR1Q99788 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.39
CMKLR1Q99788 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CMKLR1Q99788 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CMKLR1Q99788 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
CMKLR1Q99788 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.7■■□□□ 1.38
CMKLR1Q99788 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
CMKLR1Q99788 AC074183.2-201ENST00000623112 922 ntBASIC23.7■■□□□ 1.38
CMKLR1Q99788 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CMKLR1Q99788 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CMKLR1Q99788 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
CMKLR1Q99788 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.69■■□□□ 1.38
CMKLR1Q99788 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.69■■□□□ 1.38
CMKLR1Q99788 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CMKLR1Q99788 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.68■■□□□ 1.38
CMKLR1Q99788 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CMKLR1Q99788 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CMKLR1Q99788 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CMKLR1Q99788 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CMKLR1Q99788 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CMKLR1Q99788 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CMKLR1Q99788 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CMKLR1Q99788 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CMKLR1Q99788 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CMKLR1Q99788 MIR6765-201ENST00000614092 87 ntBASIC23.66■■□□□ 1.38
CMKLR1Q99788 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CMKLR1Q99788 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CMKLR1Q99788 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CMKLR1Q99788 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CMKLR1Q99788 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CMKLR1Q99788 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.65■■□□□ 1.38
CMKLR1Q99788 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.65■■□□□ 1.38
CMKLR1Q99788 AC139795.1-202ENST00000500444 432 ntBASIC23.65■■□□□ 1.38
CMKLR1Q99788 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CMKLR1Q99788 AC018755.3-202ENST00000596210 929 ntBASIC23.65■■□□□ 1.38
CMKLR1Q99788 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CMKLR1Q99788 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CMKLR1Q99788 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.64■■□□□ 1.37
CMKLR1Q99788 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.64■■□□□ 1.37
CMKLR1Q99788 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.64■■□□□ 1.37
CMKLR1Q99788 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.64■■□□□ 1.37
CMKLR1Q99788 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CMKLR1Q99788 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CMKLR1Q99788 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CMKLR1Q99788 SPCS2P3-201ENST00000500401 656 ntBASIC23.63■■□□□ 1.37
CMKLR1Q99788 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.63■■□□□ 1.37
CMKLR1Q99788 AL035685.1-201ENST00000636663 812 ntBASIC23.63■■□□□ 1.37
CMKLR1Q99788 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CMKLR1Q99788 AC010980.1-201ENST00000587192 1142 ntBASIC23.62■■□□□ 1.37
CMKLR1Q99788 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CMKLR1Q99788 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.61■■□□□ 1.37
CMKLR1Q99788 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CMKLR1Q99788 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CMKLR1Q99788 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CMKLR1Q99788 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CMKLR1Q99788 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CMKLR1Q99788 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CMKLR1Q99788 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CMKLR1Q99788 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.6■■□□□ 1.37
CMKLR1Q99788 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CMKLR1Q99788 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CMKLR1Q99788 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.6■■□□□ 1.37
CMKLR1Q99788 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CMKLR1Q99788 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CMKLR1Q99788 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms