Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC47A1Q96FL8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.17■■□□□ 1.3
SLC47A1Q96FL8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC47A1Q96FL8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC47A1Q96FL8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SLC47A1Q96FL8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SLC47A1Q96FL8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC47A1Q96FL8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SLC47A1Q96FL8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC47A1Q96FL8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC47A1Q96FL8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SLC47A1Q96FL8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SLC47A1Q96FL8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC47A1Q96FL8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC47A1Q96FL8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.15■■□□□ 1.3
SLC47A1Q96FL8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC47A1Q96FL8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
SLC47A1Q96FL8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC47A1Q96FL8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC47A1Q96FL8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC47A1Q96FL8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC47A1Q96FL8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SLC47A1Q96FL8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC47A1Q96FL8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC47A1Q96FL8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC47A1Q96FL8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC47A1Q96FL8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.13■■□□□ 1.29
SLC47A1Q96FL8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.13■■□□□ 1.29
SLC47A1Q96FL8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC47A1Q96FL8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC47A1Q96FL8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
SLC47A1Q96FL8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC47A1Q96FL8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SLC47A1Q96FL8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC47A1Q96FL8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC47A1Q96FL8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC47A1Q96FL8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC47A1Q96FL8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC47A1Q96FL8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC47A1Q96FL8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC47A1Q96FL8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC47A1Q96FL8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC47A1Q96FL8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC47A1Q96FL8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.11■■□□□ 1.29
SLC47A1Q96FL8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.11■■□□□ 1.29
SLC47A1Q96FL8 AC093323.1-202ENST00000635031 2045 ntBASIC23.11■■□□□ 1.29
SLC47A1Q96FL8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC47A1Q96FL8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC47A1Q96FL8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC47A1Q96FL8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC47A1Q96FL8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC47A1Q96FL8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC47A1Q96FL8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC47A1Q96FL8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC47A1Q96FL8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC47A1Q96FL8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.09■■□□□ 1.29
SLC47A1Q96FL8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC47A1Q96FL8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC47A1Q96FL8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC47A1Q96FL8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC47A1Q96FL8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC47A1Q96FL8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC47A1Q96FL8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC47A1Q96FL8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.08■■□□□ 1.28
SLC47A1Q96FL8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SLC47A1Q96FL8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC47A1Q96FL8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC47A1Q96FL8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC47A1Q96FL8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SLC47A1Q96FL8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.07■■□□□ 1.28
SLC47A1Q96FL8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLC47A1Q96FL8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC47A1Q96FL8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SLC47A1Q96FL8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SLC47A1Q96FL8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.06■■□□□ 1.28
SLC47A1Q96FL8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC47A1Q96FL8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC47A1Q96FL8 AC142472.1-201ENST00000612013 1741 ntBASIC23.05■■□□□ 1.28
SLC47A1Q96FL8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.05■■□□□ 1.28
SLC47A1Q96FL8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC47A1Q96FL8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.05■■□□□ 1.28
SLC47A1Q96FL8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SLC47A1Q96FL8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SLC47A1Q96FL8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC47A1Q96FL8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC47A1Q96FL8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
SLC47A1Q96FL8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.03■■□□□ 1.28
SLC47A1Q96FL8 DUX4L29-201ENST00000425409 679 ntBASIC23.03■■□□□ 1.28
SLC47A1Q96FL8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC47A1Q96FL8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC47A1Q96FL8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.02■■□□□ 1.28
SLC47A1Q96FL8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.02■■□□□ 1.28
SLC47A1Q96FL8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SLC47A1Q96FL8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.01■■□□□ 1.27
SLC47A1Q96FL8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC47A1Q96FL8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC47A1Q96FL8 AC021231.2-201ENST00000594613 730 ntBASIC23.01■■□□□ 1.27
SLC47A1Q96FL8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC47A1Q96FL8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SLC47A1Q96FL8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms