Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
USP6NLQ92738 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.44■■■□□ 2.14
USP6NLQ92738 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.44■■■□□ 2.14
USP6NLQ92738 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
USP6NLQ92738 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
USP6NLQ92738 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
USP6NLQ92738 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
USP6NLQ92738 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.43■■■□□ 2.14
USP6NLQ92738 AL592295.1-201ENST00000400984 884 ntBASIC28.43■■■□□ 2.14
USP6NLQ92738 PVT1_1.1-201ENST00000615125 194 ntBASIC28.43■■■□□ 2.14
USP6NLQ92738 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.42■■■□□ 2.14
USP6NLQ92738 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
USP6NLQ92738 AC009299.2-201ENST00000482477 511 ntBASIC28.42■■■□□ 2.14
USP6NLQ92738 MIR3960-201ENST00000583311 91 ntBASIC28.42■■■□□ 2.14
USP6NLQ92738 KRT8P33-201ENST00000508125 1423 ntBASIC28.42■■■□□ 2.14
USP6NLQ92738 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.41■■■□□ 2.14
USP6NLQ92738 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
USP6NLQ92738 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
USP6NLQ92738 MIR6765-201ENST00000614092 87 ntBASIC28.41■■■□□ 2.14
USP6NLQ92738 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.41■■■□□ 2.14
USP6NLQ92738 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
USP6NLQ92738 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.4■■■□□ 2.14
USP6NLQ92738 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
USP6NLQ92738 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.4■■■□□ 2.14
USP6NLQ92738 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
USP6NLQ92738 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
USP6NLQ92738 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
USP6NLQ92738 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
USP6NLQ92738 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
USP6NLQ92738 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
USP6NLQ92738 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.37■■■□□ 2.13
USP6NLQ92738 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.37■■■□□ 2.13
USP6NLQ92738 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.37■■■□□ 2.13
USP6NLQ92738 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
USP6NLQ92738 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
USP6NLQ92738 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.36■■■□□ 2.13
USP6NLQ92738 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.36■■■□□ 2.13
USP6NLQ92738 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.36■■■□□ 2.13
USP6NLQ92738 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
USP6NLQ92738 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
USP6NLQ92738 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28.35■■■□□ 2.13
USP6NLQ92738 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
USP6NLQ92738 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
USP6NLQ92738 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
USP6NLQ92738 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
USP6NLQ92738 AC139795.1-202ENST00000500444 432 ntBASIC28.34■■■□□ 2.13
USP6NLQ92738 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
USP6NLQ92738 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
USP6NLQ92738 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.34■■■□□ 2.13
USP6NLQ92738 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.33■■■□□ 2.13
USP6NLQ92738 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
USP6NLQ92738 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
USP6NLQ92738 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
USP6NLQ92738 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.32■■■□□ 2.12
USP6NLQ92738 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.32■■■□□ 2.12
USP6NLQ92738 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.32■■■□□ 2.12
USP6NLQ92738 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
USP6NLQ92738 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
USP6NLQ92738 YBX1P4-201ENST00000392794 808 ntBASIC28.31■■■□□ 2.12
USP6NLQ92738 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC28.31■■■□□ 2.12
USP6NLQ92738 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.31■■■□□ 2.12
USP6NLQ92738 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
USP6NLQ92738 MIR4508-201ENST00000584178 70 ntBASIC28.31■■■□□ 2.12
USP6NLQ92738 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
USP6NLQ92738 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
USP6NLQ92738 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.3■■■□□ 2.12
USP6NLQ92738 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.3■■■□□ 2.12
USP6NLQ92738 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
USP6NLQ92738 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC28.3■■■□□ 2.12
USP6NLQ92738 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC28.3■■■□□ 2.12
USP6NLQ92738 AC018755.3-202ENST00000596210 929 ntBASIC28.3■■■□□ 2.12
USP6NLQ92738 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
USP6NLQ92738 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
USP6NLQ92738 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
USP6NLQ92738 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
USP6NLQ92738 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.28■■■□□ 2.12
USP6NLQ92738 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.28■■■□□ 2.12
USP6NLQ92738 AP002414.2-202ENST00000590929 1450 ntBASIC28.27■■■□□ 2.12
USP6NLQ92738 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
USP6NLQ92738 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.27■■■□□ 2.12
USP6NLQ92738 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
USP6NLQ92738 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
USP6NLQ92738 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.27■■■□□ 2.12
USP6NLQ92738 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.27■■■□□ 2.12
USP6NLQ92738 GUSBP5-201ENST00000418136 578 ntBASIC28.27■■■□□ 2.12
USP6NLQ92738 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
USP6NLQ92738 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
USP6NLQ92738 OR2A1-AS1-204ENST00000470435 602 ntBASIC28.26■■■□□ 2.11
USP6NLQ92738 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
USP6NLQ92738 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
USP6NLQ92738 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
USP6NLQ92738 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
USP6NLQ92738 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
USP6NLQ92738 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
USP6NLQ92738 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.23■■■□□ 2.11
USP6NLQ92738 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.23■■■□□ 2.11
USP6NLQ92738 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
USP6NLQ92738 AL139393.2-201ENST00000608721 2025 ntBASIC28.23■■■□□ 2.11
USP6NLQ92738 ABCB10P3-201ENST00000561950 2166 ntBASIC28.23■■■□□ 2.11
USP6NLQ92738 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms