Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM4Q8WVI0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.14■□□□□ 0.98
SMIM4Q8WVI0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SMIM4Q8WVI0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM4Q8WVI0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM4Q8WVI0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 AC135983.2-203ENST00000454486 1613 ntBASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM4Q8WVI0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM4Q8WVI0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM4Q8WVI0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM4Q8WVI0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM4Q8WVI0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM4Q8WVI0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMIM4Q8WVI0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.1■□□□□ 0.97
SMIM4Q8WVI0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM4Q8WVI0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM4Q8WVI0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMIM4Q8WVI0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SMIM4Q8WVI0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.08■□□□□ 0.97
SMIM4Q8WVI0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMIM4Q8WVI0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMIM4Q8WVI0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.08■□□□□ 0.97
SMIM4Q8WVI0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMIM4Q8WVI0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMIM4Q8WVI0 AC142472.1-201ENST00000612013 1741 ntBASIC21.08■□□□□ 0.97
SMIM4Q8WVI0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMIM4Q8WVI0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SMIM4Q8WVI0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM4Q8WVI0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
SMIM4Q8WVI0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.07■□□□□ 0.96
SMIM4Q8WVI0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM4Q8WVI0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.07■□□□□ 0.96
SMIM4Q8WVI0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SMIM4Q8WVI0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM4Q8WVI0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM4Q8WVI0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM4Q8WVI0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.06■□□□□ 0.96
SMIM4Q8WVI0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM4Q8WVI0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.06■□□□□ 0.96
SMIM4Q8WVI0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM4Q8WVI0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.06■□□□□ 0.96
SMIM4Q8WVI0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM4Q8WVI0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM4Q8WVI0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM4Q8WVI0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM4Q8WVI0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM4Q8WVI0 AL139125.2-201ENST00000623134 1869 ntBASIC21.05■□□□□ 0.96
SMIM4Q8WVI0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.04■□□□□ 0.96
SMIM4Q8WVI0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM4Q8WVI0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM4Q8WVI0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM4Q8WVI0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM4Q8WVI0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.03■□□□□ 0.96
SMIM4Q8WVI0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM4Q8WVI0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM4Q8WVI0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM4Q8WVI0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM4Q8WVI0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.03■□□□□ 0.96
SMIM4Q8WVI0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM4Q8WVI0 WHAMMP2-203ENST00000563942 1603 ntBASIC21.02■□□□□ 0.96
SMIM4Q8WVI0 AC010501.1-201ENST00000606270 1962 ntBASIC21.02■□□□□ 0.96
SMIM4Q8WVI0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.02■□□□□ 0.95
SMIM4Q8WVI0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM4Q8WVI0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM4Q8WVI0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM4Q8WVI0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM4Q8WVI0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SMIM4Q8WVI0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM4Q8WVI0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM4Q8WVI0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM4Q8WVI0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM4Q8WVI0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM4Q8WVI0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SMIM4Q8WVI0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM4Q8WVI0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21■□□□□ 0.95
SMIM4Q8WVI0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM4Q8WVI0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21■□□□□ 0.95
SMIM4Q8WVI0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM4Q8WVI0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM4Q8WVI0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM4Q8WVI0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM4Q8WVI0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM4Q8WVI0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM4Q8WVI0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM4Q8WVI0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM4Q8WVI0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.99■□□□□ 0.95
SMIM4Q8WVI0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM4Q8WVI0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM4Q8WVI0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms