Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.62■■□□□ 1.69
CCHCR1Q8TD31 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.62■■□□□ 1.69
CCHCR1Q8TD31 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.62■■□□□ 1.69
CCHCR1Q8TD31 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCHCR1Q8TD31 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCHCR1Q8TD31 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCHCR1Q8TD31 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCHCR1Q8TD31 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCHCR1Q8TD31 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.61■■□□□ 1.69
CCHCR1Q8TD31 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CCHCR1Q8TD31 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.61■■□□□ 1.69
CCHCR1Q8TD31 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCHCR1Q8TD31 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCHCR1Q8TD31 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 DUX4L13-201ENST00000554103 1267 ntBASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 DUX4L15-201ENST00000611059 1267 ntBASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 DUX4L23-201ENST00000615195 1269 ntBASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 DUX4L24-201ENST00000617576 1269 ntBASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 DUX4L22-201ENST00000618238 1269 ntBASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 DUX4L20-201ENST00000619712 1269 ntBASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 DUX4L21-201ENST00000622058 1269 ntBASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 DUX4L10-201ENST00000622460 1267 ntBASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 DUX4L25-201ENST00000624915 1269 ntBASIC25.6■■□□□ 1.69
CCHCR1Q8TD31 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCHCR1Q8TD31 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCHCR1Q8TD31 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.59■■□□□ 1.69
CCHCR1Q8TD31 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
CCHCR1Q8TD31 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCHCR1Q8TD31 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCHCR1Q8TD31 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CCHCR1Q8TD31 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.58■■□□□ 1.69
CCHCR1Q8TD31 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CCHCR1Q8TD31 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.58■■□□□ 1.69
CCHCR1Q8TD31 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.58■■□□□ 1.69
CCHCR1Q8TD31 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCHCR1Q8TD31 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCHCR1Q8TD31 AP004609.3-201ENST00000610705 1884 ntBASIC25.56■■□□□ 1.68
CCHCR1Q8TD31 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.56■■□□□ 1.68
CCHCR1Q8TD31 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCHCR1Q8TD31 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCHCR1Q8TD31 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CCHCR1Q8TD31 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCHCR1Q8TD31 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCHCR1Q8TD31 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.54■■□□□ 1.68
CCHCR1Q8TD31 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCHCR1Q8TD31 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCHCR1Q8TD31 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCHCR1Q8TD31 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.53■■□□□ 1.68
CCHCR1Q8TD31 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCHCR1Q8TD31 AC110285.7-201ENST00000624417 1536 ntBASIC25.53■■□□□ 1.68
CCHCR1Q8TD31 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.52■■□□□ 1.68
CCHCR1Q8TD31 DUSP8P4-201ENST00000399538 1761 ntBASIC25.51■■□□□ 1.67
CCHCR1Q8TD31 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCHCR1Q8TD31 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCHCR1Q8TD31 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCHCR1Q8TD31 AC092803.2-201ENST00000564287 1899 ntBASIC25.51■■□□□ 1.67
CCHCR1Q8TD31 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
CCHCR1Q8TD31 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCHCR1Q8TD31 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCHCR1Q8TD31 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.5■■□□□ 1.67
CCHCR1Q8TD31 MIR3648-2-201ENST00000581792 180 ntBASIC25.5■■□□□ 1.67
CCHCR1Q8TD31 MIR3648-1-201ENST00000615959 180 ntBASIC25.5■■□□□ 1.67
CCHCR1Q8TD31 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.5■■□□□ 1.67
CCHCR1Q8TD31 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.49■■□□□ 1.67
CCHCR1Q8TD31 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.49■■□□□ 1.67
CCHCR1Q8TD31 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.49■■□□□ 1.67
CCHCR1Q8TD31 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
CCHCR1Q8TD31 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.48■■□□□ 1.67
CCHCR1Q8TD31 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCHCR1Q8TD31 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCHCR1Q8TD31 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
CCHCR1Q8TD31 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.47■■□□□ 1.67
CCHCR1Q8TD31 AC142472.1-201ENST00000612013 1741 ntBASIC25.47■■□□□ 1.67
CCHCR1Q8TD31 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCHCR1Q8TD31 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.47■■□□□ 1.67
CCHCR1Q8TD31 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.47■■□□□ 1.67
CCHCR1Q8TD31 CR559946.2-201ENST00000623684 991 ntBASIC25.47■■□□□ 1.67
CCHCR1Q8TD31 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
CCHCR1Q8TD31 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCHCR1Q8TD31 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CCHCR1Q8TD31 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCHCR1Q8TD31 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.45■■□□□ 1.66
CCHCR1Q8TD31 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCHCR1Q8TD31 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.45■■□□□ 1.66
CCHCR1Q8TD31 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCHCR1Q8TD31 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCHCR1Q8TD31 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.44■■□□□ 1.66
CCHCR1Q8TD31 AC016575.1-201ENST00000607026 382 ntBASIC25.44■■□□□ 1.66
CCHCR1Q8TD31 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCHCR1Q8TD31 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCHCR1Q8TD31 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.43■■□□□ 1.66
CCHCR1Q8TD31 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.43■■□□□ 1.66
CCHCR1Q8TD31 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms