Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LSMEM1Q8N8F7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
LSMEM1Q8N8F7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LSMEM1Q8N8F7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 ABHD17AP4-201ENST00000411545 909 ntBASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 AC148477.6-201ENST00000623746 465 ntBASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 AC142472.1-201ENST00000612013 1741 ntBASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
LSMEM1Q8N8F7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LSMEM1Q8N8F7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LSMEM1Q8N8F7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LSMEM1Q8N8F7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LSMEM1Q8N8F7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.58■■□□□ 1.21
LSMEM1Q8N8F7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.58■■□□□ 1.21
LSMEM1Q8N8F7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
LSMEM1Q8N8F7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
LSMEM1Q8N8F7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LSMEM1Q8N8F7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
LSMEM1Q8N8F7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.57■■□□□ 1.2
LSMEM1Q8N8F7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LSMEM1Q8N8F7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
LSMEM1Q8N8F7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
LSMEM1Q8N8F7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 MIR219A2-201ENST00000608502 1504 ntBASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LSMEM1Q8N8F7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LSMEM1Q8N8F7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.55■■□□□ 1.2
LSMEM1Q8N8F7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.55■■□□□ 1.2
LSMEM1Q8N8F7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.55■■□□□ 1.2
LSMEM1Q8N8F7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
LSMEM1Q8N8F7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.54■■□□□ 1.2
LSMEM1Q8N8F7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
LSMEM1Q8N8F7 AC091060.1-201ENST00000623524 1766 ntBASIC22.54■■□□□ 1.2
LSMEM1Q8N8F7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LSMEM1Q8N8F7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LSMEM1Q8N8F7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LSMEM1Q8N8F7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.53■■□□□ 1.2
LSMEM1Q8N8F7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LSMEM1Q8N8F7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
LSMEM1Q8N8F7 CR559946.2-201ENST00000623684 991 ntBASIC22.52■■□□□ 1.2
LSMEM1Q8N8F7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LSMEM1Q8N8F7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 HLA-V-202ENST00000446817 847 ntBASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.48■■□□□ 1.19
LSMEM1Q8N8F7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
LSMEM1Q8N8F7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.47■■□□□ 1.19
LSMEM1Q8N8F7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LSMEM1Q8N8F7 MIR3648-2-201ENST00000581792 180 ntBASIC22.47■■□□□ 1.19
LSMEM1Q8N8F7 MIR3648-1-201ENST00000615959 180 ntBASIC22.47■■□□□ 1.19
LSMEM1Q8N8F7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LSMEM1Q8N8F7 AC145676.1-201ENST00000514988 2004 ntBASIC22.47■■□□□ 1.19
LSMEM1Q8N8F7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.46■■□□□ 1.19
LSMEM1Q8N8F7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LSMEM1Q8N8F7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LSMEM1Q8N8F7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
LSMEM1Q8N8F7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.45■■□□□ 1.19
LSMEM1Q8N8F7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LSMEM1Q8N8F7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
LSMEM1Q8N8F7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
LSMEM1Q8N8F7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.45■■□□□ 1.18
LSMEM1Q8N8F7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms