Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATPAF2Q8N5M1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
ATPAF2Q8N5M1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATPAF2Q8N5M1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
ATPAF2Q8N5M1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATPAF2Q8N5M1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATPAF2Q8N5M1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ATPAF2Q8N5M1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
ATPAF2Q8N5M1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
ATPAF2Q8N5M1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.39■■□□□ 1.65
ATPAF2Q8N5M1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.38■■□□□ 1.65
ATPAF2Q8N5M1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ATPAF2Q8N5M1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ATPAF2Q8N5M1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
ATPAF2Q8N5M1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ATPAF2Q8N5M1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.38■■□□□ 1.65
ATPAF2Q8N5M1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ATPAF2Q8N5M1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ATPAF2Q8N5M1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.37■■□□□ 1.65
ATPAF2Q8N5M1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
ATPAF2Q8N5M1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ATPAF2Q8N5M1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
ATPAF2Q8N5M1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.36■■□□□ 1.65
ATPAF2Q8N5M1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.36■■□□□ 1.65
ATPAF2Q8N5M1 MIR4449-201ENST00000578365 66 ntBASIC25.36■■□□□ 1.65
ATPAF2Q8N5M1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ATPAF2Q8N5M1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
ATPAF2Q8N5M1 AL359258.2-201ENST00000564063 1566 ntBASIC25.35■■□□□ 1.65
ATPAF2Q8N5M1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ATPAF2Q8N5M1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ATPAF2Q8N5M1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.35■■□□□ 1.65
ATPAF2Q8N5M1 AC126177.7-201ENST00000547904 679 ntBASIC25.35■■□□□ 1.65
ATPAF2Q8N5M1 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.35■■□□□ 1.65
ATPAF2Q8N5M1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ATPAF2Q8N5M1 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.35■■□□□ 1.65
ATPAF2Q8N5M1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATPAF2Q8N5M1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
ATPAF2Q8N5M1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
ATPAF2Q8N5M1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.34■■□□□ 1.65
ATPAF2Q8N5M1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATPAF2Q8N5M1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
ATPAF2Q8N5M1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATPAF2Q8N5M1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATPAF2Q8N5M1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.32■■□□□ 1.64
ATPAF2Q8N5M1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.32■■□□□ 1.64
ATPAF2Q8N5M1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
ATPAF2Q8N5M1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.31■■□□□ 1.64
ATPAF2Q8N5M1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATPAF2Q8N5M1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ATPAF2Q8N5M1 AP004609.3-201ENST00000610705 1884 ntBASIC25.31■■□□□ 1.64
ATPAF2Q8N5M1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATPAF2Q8N5M1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATPAF2Q8N5M1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ATPAF2Q8N5M1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATPAF2Q8N5M1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATPAF2Q8N5M1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.3■■□□□ 1.64
ATPAF2Q8N5M1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ATPAF2Q8N5M1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ATPAF2Q8N5M1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ATPAF2Q8N5M1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.29■■□□□ 1.64
ATPAF2Q8N5M1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.29■■□□□ 1.64
ATPAF2Q8N5M1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ATPAF2Q8N5M1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ATPAF2Q8N5M1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.28■■□□□ 1.64
ATPAF2Q8N5M1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.28■■□□□ 1.64
ATPAF2Q8N5M1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.27■■□□□ 1.64
ATPAF2Q8N5M1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.27■■□□□ 1.64
ATPAF2Q8N5M1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATPAF2Q8N5M1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATPAF2Q8N5M1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ATPAF2Q8N5M1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATPAF2Q8N5M1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ATPAF2Q8N5M1 AC142472.1-201ENST00000612013 1741 ntBASIC25.26■■□□□ 1.63
ATPAF2Q8N5M1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ATPAF2Q8N5M1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATPAF2Q8N5M1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATPAF2Q8N5M1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.26■■□□□ 1.63
ATPAF2Q8N5M1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATPAF2Q8N5M1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ATPAF2Q8N5M1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ATPAF2Q8N5M1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.24■■□□□ 1.63
ATPAF2Q8N5M1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATPAF2Q8N5M1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ATPAF2Q8N5M1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
ATPAF2Q8N5M1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ATPAF2Q8N5M1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.23■■□□□ 1.63
ATPAF2Q8N5M1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ATPAF2Q8N5M1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ATPAF2Q8N5M1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ATPAF2Q8N5M1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.22■■□□□ 1.63
ATPAF2Q8N5M1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ATPAF2Q8N5M1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ATPAF2Q8N5M1 AC060814.1-201ENST00000554326 538 ntBASIC25.21■■□□□ 1.63
ATPAF2Q8N5M1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ATPAF2Q8N5M1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
ATPAF2Q8N5M1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.2■■□□□ 1.63
ATPAF2Q8N5M1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ATPAF2Q8N5M1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ATPAF2Q8N5M1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.2■■□□□ 1.62
ATPAF2Q8N5M1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms