Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC35.26■■■■□ 3.23
XRN1Q8IZH2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC35.26■■■■□ 3.23
XRN1Q8IZH2 MIR3960-201ENST00000583311 91 ntBASIC35.26■■■■□ 3.23
XRN1Q8IZH2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
XRN1Q8IZH2 AC131212.1-201ENST00000613771 668 ntBASIC35.25■■■■□ 3.23
XRN1Q8IZH2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC35.25■■■■□ 3.23
XRN1Q8IZH2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC35.24■■■■□ 3.23
XRN1Q8IZH2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC35.24■■■■□ 3.23
XRN1Q8IZH2 AC139795.1-202ENST00000500444 432 ntBASIC35.24■■■■□ 3.23
XRN1Q8IZH2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
XRN1Q8IZH2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
XRN1Q8IZH2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC35.23■■■■□ 3.23
XRN1Q8IZH2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC35.23■■■■□ 3.23
XRN1Q8IZH2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
XRN1Q8IZH2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC35.23■■■■□ 3.23
XRN1Q8IZH2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC35.22■■■■□ 3.23
XRN1Q8IZH2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
XRN1Q8IZH2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC35.22■■■■□ 3.23
XRN1Q8IZH2 OR2A1-AS1-204ENST00000470435 602 ntBASIC35.22■■■■□ 3.23
XRN1Q8IZH2 AC103724.3-201ENST00000564481 992 ntBASIC35.22■■■■□ 3.23
XRN1Q8IZH2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC35.22■■■■□ 3.23
XRN1Q8IZH2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC35.22■■■■□ 3.23
XRN1Q8IZH2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
XRN1Q8IZH2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
XRN1Q8IZH2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC35.21■■■■□ 3.23
XRN1Q8IZH2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
XRN1Q8IZH2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
XRN1Q8IZH2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
XRN1Q8IZH2 ST7-AS1-201ENST00000456775 1889 ntBASIC35.2■■■■□ 3.23
XRN1Q8IZH2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
XRN1Q8IZH2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC35.2■■■■□ 3.22
XRN1Q8IZH2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.22
XRN1Q8IZH2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
XRN1Q8IZH2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
XRN1Q8IZH2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC35.19■■■■□ 3.22
XRN1Q8IZH2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC35.18■■■■□ 3.22
XRN1Q8IZH2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
XRN1Q8IZH2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC35.18■■■■□ 3.22
XRN1Q8IZH2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC35.18■■■■□ 3.22
XRN1Q8IZH2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC35.17■■■■□ 3.22
XRN1Q8IZH2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC35.17■■■■□ 3.22
XRN1Q8IZH2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
XRN1Q8IZH2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
XRN1Q8IZH2 BHLHE23-202ENST00000612929 1109 ntBASIC35.17■■■■□ 3.22
XRN1Q8IZH2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
XRN1Q8IZH2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC35.16■■■■□ 3.22
XRN1Q8IZH2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC35.15■■■■□ 3.22
XRN1Q8IZH2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
XRN1Q8IZH2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC35.15■■■■□ 3.22
XRN1Q8IZH2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC35.15■■■■□ 3.22
XRN1Q8IZH2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC35.15■■■■□ 3.22
XRN1Q8IZH2 THA1P-201ENST00000590384 1145 ntBASIC35.15■■■■□ 3.22
XRN1Q8IZH2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
XRN1Q8IZH2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC35.13■■■■□ 3.21
XRN1Q8IZH2 YBX1P4-201ENST00000392794 808 ntBASIC35.13■■■■□ 3.21
XRN1Q8IZH2 HYI-210ENST00000486909 905 ntTSL 5 BASIC35.13■■■■□ 3.21
XRN1Q8IZH2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC35.13■■■■□ 3.21
XRN1Q8IZH2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
XRN1Q8IZH2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC35.13■■■■□ 3.21
XRN1Q8IZH2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
XRN1Q8IZH2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
XRN1Q8IZH2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
XRN1Q8IZH2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC35.11■■■■□ 3.21
XRN1Q8IZH2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC35.1■■■■□ 3.21
XRN1Q8IZH2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC35.1■■■■□ 3.21
XRN1Q8IZH2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC35.09■■■■□ 3.21
XRN1Q8IZH2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC35.09■■■■□ 3.21
XRN1Q8IZH2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC35.09■■■■□ 3.21
XRN1Q8IZH2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC35.09■■■■□ 3.21
XRN1Q8IZH2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
XRN1Q8IZH2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC35.09■■■■□ 3.21
XRN1Q8IZH2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
XRN1Q8IZH2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC35.08■■■■□ 3.21
XRN1Q8IZH2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
XRN1Q8IZH2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC35.08■■■■□ 3.21
XRN1Q8IZH2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
XRN1Q8IZH2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC35.06■■■■□ 3.2
XRN1Q8IZH2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC35.06■■■■□ 3.2
XRN1Q8IZH2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC35.05■■■■□ 3.2
XRN1Q8IZH2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC35.05■■■■□ 3.2
XRN1Q8IZH2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
XRN1Q8IZH2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC35.04■■■■□ 3.2
XRN1Q8IZH2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC35.03■■■■□ 3.2
XRN1Q8IZH2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC35.03■■■■□ 3.2
XRN1Q8IZH2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC35.03■■■■□ 3.2
XRN1Q8IZH2 AL356441.2-201ENST00000443009 864 ntBASIC35.03■■■■□ 3.2
XRN1Q8IZH2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC35.03■■■■□ 3.2
XRN1Q8IZH2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
XRN1Q8IZH2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC35.01■■■■□ 3.2
XRN1Q8IZH2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC35.01■■■■□ 3.2
XRN1Q8IZH2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC35.01■■■■□ 3.2
XRN1Q8IZH2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC35.01■■■■□ 3.19
XRN1Q8IZH2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC35■■■■□ 3.19
XRN1Q8IZH2 AL031848.2-201ENST00000607670 837 ntBASIC35■■■■□ 3.19
XRN1Q8IZH2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC35■■■■□ 3.19
XRN1Q8IZH2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
XRN1Q8IZH2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
XRN1Q8IZH2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
XRN1Q8IZH2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC34.98■■■■□ 3.19
XRN1Q8IZH2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms