Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL27A1Q8IZC6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.83■■□□□ 1.41
COL27A1Q8IZC6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
COL27A1Q8IZC6 AC009299.2-201ENST00000482477 511 ntBASIC23.83■■□□□ 1.4
COL27A1Q8IZC6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.82■■□□□ 1.4
COL27A1Q8IZC6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
COL27A1Q8IZC6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.82■■□□□ 1.4
COL27A1Q8IZC6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.81■■□□□ 1.4
COL27A1Q8IZC6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.81■■□□□ 1.4
COL27A1Q8IZC6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL27A1Q8IZC6 AL139393.2-201ENST00000608721 2025 ntBASIC23.81■■□□□ 1.4
COL27A1Q8IZC6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL27A1Q8IZC6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
COL27A1Q8IZC6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL27A1Q8IZC6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.8■■□□□ 1.4
COL27A1Q8IZC6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.8■■□□□ 1.4
COL27A1Q8IZC6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
COL27A1Q8IZC6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.79■■□□□ 1.4
COL27A1Q8IZC6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL27A1Q8IZC6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL27A1Q8IZC6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
COL27A1Q8IZC6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL27A1Q8IZC6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL27A1Q8IZC6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
COL27A1Q8IZC6 MIR3960-201ENST00000583311 91 ntBASIC23.78■■□□□ 1.4
COL27A1Q8IZC6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.78■■□□□ 1.4
COL27A1Q8IZC6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL27A1Q8IZC6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL27A1Q8IZC6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL27A1Q8IZC6 MIR4508-201ENST00000584178 70 ntBASIC23.77■■□□□ 1.4
COL27A1Q8IZC6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
COL27A1Q8IZC6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL27A1Q8IZC6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL27A1Q8IZC6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL27A1Q8IZC6 AC010980.1-201ENST00000587192 1142 ntBASIC23.77■■□□□ 1.4
COL27A1Q8IZC6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL27A1Q8IZC6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
COL27A1Q8IZC6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
COL27A1Q8IZC6 MIR6765-201ENST00000614092 87 ntBASIC23.76■■□□□ 1.39
COL27A1Q8IZC6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.75■■□□□ 1.39
COL27A1Q8IZC6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.75■■□□□ 1.39
COL27A1Q8IZC6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL27A1Q8IZC6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL27A1Q8IZC6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL27A1Q8IZC6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL27A1Q8IZC6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL27A1Q8IZC6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL27A1Q8IZC6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
COL27A1Q8IZC6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL27A1Q8IZC6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL27A1Q8IZC6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL27A1Q8IZC6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
COL27A1Q8IZC6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL27A1Q8IZC6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL27A1Q8IZC6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.72■■□□□ 1.39
COL27A1Q8IZC6 KRT8P33-201ENST00000508125 1423 ntBASIC23.72■■□□□ 1.39
COL27A1Q8IZC6 AC103834.1-201ENST00000520383 144 ntBASIC23.72■■□□□ 1.39
COL27A1Q8IZC6 AC103724.3-201ENST00000564481 992 ntBASIC23.72■■□□□ 1.39
COL27A1Q8IZC6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL27A1Q8IZC6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.71■■□□□ 1.39
COL27A1Q8IZC6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL27A1Q8IZC6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL27A1Q8IZC6 AL359504.2-201ENST00000605506 1601 ntBASIC23.71■■□□□ 1.39
COL27A1Q8IZC6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL27A1Q8IZC6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.71■■□□□ 1.39
COL27A1Q8IZC6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
COL27A1Q8IZC6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
COL27A1Q8IZC6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
COL27A1Q8IZC6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.7■■□□□ 1.39
COL27A1Q8IZC6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
COL27A1Q8IZC6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.7■■□□□ 1.38
COL27A1Q8IZC6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.7■■□□□ 1.38
COL27A1Q8IZC6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.69■■□□□ 1.38
COL27A1Q8IZC6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.69■■□□□ 1.38
COL27A1Q8IZC6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL27A1Q8IZC6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.68■■□□□ 1.38
COL27A1Q8IZC6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL27A1Q8IZC6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL27A1Q8IZC6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL27A1Q8IZC6 AC139795.1-202ENST00000500444 432 ntBASIC23.67■■□□□ 1.38
COL27A1Q8IZC6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL27A1Q8IZC6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL27A1Q8IZC6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL27A1Q8IZC6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.66■■□□□ 1.38
COL27A1Q8IZC6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL27A1Q8IZC6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL27A1Q8IZC6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.65■■□□□ 1.38
COL27A1Q8IZC6 AC074183.2-201ENST00000623112 922 ntBASIC23.65■■□□□ 1.38
COL27A1Q8IZC6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.65■■□□□ 1.38
COL27A1Q8IZC6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL27A1Q8IZC6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL27A1Q8IZC6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.64■■□□□ 1.37
COL27A1Q8IZC6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL27A1Q8IZC6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL27A1Q8IZC6 AL592295.1-201ENST00000400984 884 ntBASIC23.64■■□□□ 1.37
COL27A1Q8IZC6 GUSBP5-201ENST00000418136 578 ntBASIC23.64■■□□□ 1.37
COL27A1Q8IZC6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL27A1Q8IZC6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL27A1Q8IZC6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL27A1Q8IZC6 WHAMMP3-201ENST00000611636 1609 ntBASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms