Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
CCDC25Q86WR0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CCDC25Q86WR0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC25Q86WR0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC25Q86WR0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC25Q86WR0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC25Q86WR0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CCDC25Q86WR0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
CCDC25Q86WR0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC25Q86WR0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC25Q86WR0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC25Q86WR0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.32■■□□□ 1.64
CCDC25Q86WR0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC25Q86WR0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.3■■□□□ 1.64
CCDC25Q86WR0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC25Q86WR0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CCDC25Q86WR0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.3■■□□□ 1.64
CCDC25Q86WR0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.3■■□□□ 1.64
CCDC25Q86WR0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC25Q86WR0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC25Q86WR0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.29■■□□□ 1.64
CCDC25Q86WR0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.29■■□□□ 1.64
CCDC25Q86WR0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
CCDC25Q86WR0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC25Q86WR0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.28■■□□□ 1.64
CCDC25Q86WR0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC25Q86WR0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
CCDC25Q86WR0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC25Q86WR0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC25Q86WR0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC25Q86WR0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC25Q86WR0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC25Q86WR0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.27■■□□□ 1.64
CCDC25Q86WR0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.27■■□□□ 1.64
CCDC25Q86WR0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.26■■□□□ 1.63
CCDC25Q86WR0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC25Q86WR0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.26■■□□□ 1.63
CCDC25Q86WR0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.26■■□□□ 1.63
CCDC25Q86WR0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.26■■□□□ 1.63
CCDC25Q86WR0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC25Q86WR0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC25Q86WR0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC25Q86WR0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC25Q86WR0 AC142472.1-201ENST00000612013 1741 ntBASIC25.24■■□□□ 1.63
CCDC25Q86WR0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC25Q86WR0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC25Q86WR0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC25Q86WR0 AC110285.7-201ENST00000624417 1536 ntBASIC25.23■■□□□ 1.63
CCDC25Q86WR0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CCDC25Q86WR0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC25Q86WR0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.23■■□□□ 1.63
CCDC25Q86WR0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.23■■□□□ 1.63
CCDC25Q86WR0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC25Q86WR0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC25Q86WR0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC25Q86WR0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC25Q86WR0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
CCDC25Q86WR0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC25Q86WR0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.21■■□□□ 1.63
CCDC25Q86WR0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC25Q86WR0 MIR3665-201ENST00000578708 105 ntBASIC25.2■■□□□ 1.62
CCDC25Q86WR0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.2■■□□□ 1.62
CCDC25Q86WR0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CCDC25Q86WR0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
CCDC25Q86WR0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.19■■□□□ 1.62
CCDC25Q86WR0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
CCDC25Q86WR0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC25Q86WR0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.18■■□□□ 1.62
CCDC25Q86WR0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCDC25Q86WR0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CCDC25Q86WR0 WHAMMP3-201ENST00000611636 1609 ntBASIC25.18■■□□□ 1.62
CCDC25Q86WR0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCDC25Q86WR0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCDC25Q86WR0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
CCDC25Q86WR0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
CCDC25Q86WR0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC25Q86WR0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC25Q86WR0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.17■■□□□ 1.62
CCDC25Q86WR0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC25Q86WR0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC25Q86WR0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC25Q86WR0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC25Q86WR0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.16■■□□□ 1.62
CCDC25Q86WR0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.16■■□□□ 1.62
CCDC25Q86WR0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC25Q86WR0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC25Q86WR0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC25Q86WR0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC25Q86WR0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC25Q86WR0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.15■■□□□ 1.62
CCDC25Q86WR0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC25Q86WR0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC25Q86WR0 AC093323.1-202ENST00000635031 2045 ntBASIC25.14■■□□□ 1.62
CCDC25Q86WR0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.14■■□□□ 1.62
CCDC25Q86WR0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC25Q86WR0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC25Q86WR0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.14■■□□□ 1.61
CCDC25Q86WR0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC25Q86WR0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC25Q86WR0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms