Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.83■■□□□ 1.56
CDHR3Q6ZTQ4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
CDHR3Q6ZTQ4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDHR3Q6ZTQ4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.82■■□□□ 1.56
CDHR3Q6ZTQ4 CR559946.2-201ENST00000623684 991 ntBASIC24.82■■□□□ 1.56
CDHR3Q6ZTQ4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.82■■□□□ 1.56
CDHR3Q6ZTQ4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDHR3Q6ZTQ4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.81■■□□□ 1.56
CDHR3Q6ZTQ4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
CDHR3Q6ZTQ4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDHR3Q6ZTQ4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.8■■□□□ 1.56
CDHR3Q6ZTQ4 AC016575.1-201ENST00000607026 382 ntBASIC24.8■■□□□ 1.56
CDHR3Q6ZTQ4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDHR3Q6ZTQ4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDHR3Q6ZTQ4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.79■■□□□ 1.56
CDHR3Q6ZTQ4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDHR3Q6ZTQ4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.79■■□□□ 1.56
CDHR3Q6ZTQ4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.79■■□□□ 1.56
CDHR3Q6ZTQ4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDHR3Q6ZTQ4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.79■■□□□ 1.56
CDHR3Q6ZTQ4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDHR3Q6ZTQ4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDHR3Q6ZTQ4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDHR3Q6ZTQ4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 DUX4L13-201ENST00000554103 1267 ntBASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 DUX4L15-201ENST00000611059 1267 ntBASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 DUX4L23-201ENST00000615195 1269 ntBASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 DUX4L24-201ENST00000617576 1269 ntBASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 DUX4L22-201ENST00000618238 1269 ntBASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 DUX4L20-201ENST00000619712 1269 ntBASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 DUX4L21-201ENST00000622058 1269 ntBASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 DUX4L10-201ENST00000622460 1267 ntBASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 DUX4L25-201ENST00000624915 1269 ntBASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDHR3Q6ZTQ4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.77■■□□□ 1.56
CDHR3Q6ZTQ4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDHR3Q6ZTQ4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDHR3Q6ZTQ4 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.76■■□□□ 1.55
CDHR3Q6ZTQ4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDHR3Q6ZTQ4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDHR3Q6ZTQ4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDHR3Q6ZTQ4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDHR3Q6ZTQ4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDHR3Q6ZTQ4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDHR3Q6ZTQ4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.74■■□□□ 1.55
CDHR3Q6ZTQ4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDHR3Q6ZTQ4 MIR639-201ENST00000384974 98 ntBASIC24.74■■□□□ 1.55
CDHR3Q6ZTQ4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CDHR3Q6ZTQ4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.74■■□□□ 1.55
CDHR3Q6ZTQ4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.73■■□□□ 1.55
CDHR3Q6ZTQ4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.73■■□□□ 1.55
CDHR3Q6ZTQ4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CDHR3Q6ZTQ4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CDHR3Q6ZTQ4 AP004609.3-201ENST00000610705 1884 ntBASIC24.72■■□□□ 1.55
CDHR3Q6ZTQ4 DUSP8P4-201ENST00000399538 1761 ntBASIC24.72■■□□□ 1.55
CDHR3Q6ZTQ4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDHR3Q6ZTQ4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.72■■□□□ 1.55
CDHR3Q6ZTQ4 AC092803.2-201ENST00000564287 1899 ntBASIC24.72■■□□□ 1.55
CDHR3Q6ZTQ4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDHR3Q6ZTQ4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDHR3Q6ZTQ4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDHR3Q6ZTQ4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.71■■□□□ 1.55
CDHR3Q6ZTQ4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.71■■□□□ 1.55
CDHR3Q6ZTQ4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.7■■□□□ 1.55
CDHR3Q6ZTQ4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
CDHR3Q6ZTQ4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDHR3Q6ZTQ4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDHR3Q6ZTQ4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDHR3Q6ZTQ4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
CDHR3Q6ZTQ4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.69■■□□□ 1.54
CDHR3Q6ZTQ4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDHR3Q6ZTQ4 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.68■■□□□ 1.54
CDHR3Q6ZTQ4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CDHR3Q6ZTQ4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CDHR3Q6ZTQ4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDHR3Q6ZTQ4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDHR3Q6ZTQ4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDHR3Q6ZTQ4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDHR3Q6ZTQ4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDHR3Q6ZTQ4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.66■■□□□ 1.54
CDHR3Q6ZTQ4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
CDHR3Q6ZTQ4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDHR3Q6ZTQ4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDHR3Q6ZTQ4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDHR3Q6ZTQ4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDHR3Q6ZTQ4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CDHR3Q6ZTQ4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CDHR3Q6ZTQ4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CDHR3Q6ZTQ4 MIR4449-201ENST00000578365 66 ntBASIC24.65■■□□□ 1.54
CDHR3Q6ZTQ4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDHR3Q6ZTQ4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.64■■□□□ 1.54
CDHR3Q6ZTQ4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDHR3Q6ZTQ4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDHR3Q6ZTQ4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDHR3Q6ZTQ4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDHR3Q6ZTQ4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDHR3Q6ZTQ4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDHR3Q6ZTQ4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms