Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AC133561.1-201ENST00000568600 2415 ntBASIC18.57■□□□□ 0.56
MRPL54Q6P161 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL54Q6P161 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL54Q6P161 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MRPL54Q6P161 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL54Q6P161 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.56■□□□□ 0.56
MRPL54Q6P161 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
MRPL54Q6P161 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL54Q6P161 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL54Q6P161 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.55■□□□□ 0.56
MRPL54Q6P161 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL54Q6P161 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL54Q6P161 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MRPL54Q6P161 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MRPL54Q6P161 AL031258.1-201ENST00000623562 325 ntBASIC18.55■□□□□ 0.56
MRPL54Q6P161 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.55■□□□□ 0.56
MRPL54Q6P161 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL54Q6P161 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL54Q6P161 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
MRPL54Q6P161 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL54Q6P161 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
MRPL54Q6P161 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MRPL54Q6P161 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.54■□□□□ 0.56
MRPL54Q6P161 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL54Q6P161 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MRPL54Q6P161 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL54Q6P161 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL54Q6P161 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL54Q6P161 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL54Q6P161 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL54Q6P161 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL54Q6P161 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL54Q6P161 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL54Q6P161 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRPL54Q6P161 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRPL54Q6P161 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPL54Q6P161 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.51■□□□□ 0.55
MRPL54Q6P161 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPL54Q6P161 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPL54Q6P161 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.51■□□□□ 0.55
MRPL54Q6P161 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL54Q6P161 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL54Q6P161 AC018358.1-201ENST00000631079 1402 ntBASIC18.5■□□□□ 0.55
MRPL54Q6P161 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL54Q6P161 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
MRPL54Q6P161 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL54Q6P161 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.5■□□□□ 0.55
MRPL54Q6P161 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL54Q6P161 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL54Q6P161 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL54Q6P161 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL54Q6P161 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
MRPL54Q6P161 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MRPL54Q6P161 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MRPL54Q6P161 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL54Q6P161 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.49■□□□□ 0.55
MRPL54Q6P161 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL54Q6P161 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.49■□□□□ 0.55
MRPL54Q6P161 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL54Q6P161 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL54Q6P161 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL54Q6P161 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL54Q6P161 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL54Q6P161 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC18.48■□□□□ 0.55
MRPL54Q6P161 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
MRPL54Q6P161 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL54Q6P161 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.48■□□□□ 0.55
MRPL54Q6P161 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.48■□□□□ 0.55
MRPL54Q6P161 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL54Q6P161 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL54Q6P161 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL54Q6P161 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL54Q6P161 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
MRPL54Q6P161 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
MRPL54Q6P161 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL54Q6P161 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MRPL54Q6P161 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MRPL54Q6P161 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
MRPL54Q6P161 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
MRPL54Q6P161 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
MRPL54Q6P161 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL54Q6P161 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
MRPL54Q6P161 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL54Q6P161 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL54Q6P161 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.45■□□□□ 0.54
MRPL54Q6P161 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL54Q6P161 AP004609.3-201ENST00000610705 1884 ntBASIC18.45■□□□□ 0.54
MRPL54Q6P161 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL54Q6P161 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL54Q6P161 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL54Q6P161 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL54Q6P161 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL54Q6P161 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL54Q6P161 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.44■□□□□ 0.54
MRPL54Q6P161 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.44■□□□□ 0.54
MRPL54Q6P161 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL54Q6P161 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MRPL54Q6P161 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.43■□□□□ 0.54
MRPL54Q6P161 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPL54Q6P161 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms