Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FREM1Q5H8C1 BX255925.1-201ENST00000566954 1854 ntBASIC21.94■■□□□ 1.1
FREM1Q5H8C1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
FREM1Q5H8C1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
FREM1Q5H8C1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
FREM1Q5H8C1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.94■■□□□ 1.1
FREM1Q5H8C1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.93■■□□□ 1.1
FREM1Q5H8C1 ABHD17AP5-201ENST00000580133 923 ntBASIC21.93■■□□□ 1.1
FREM1Q5H8C1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.93■■□□□ 1.1
FREM1Q5H8C1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FREM1Q5H8C1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
FREM1Q5H8C1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FREM1Q5H8C1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FREM1Q5H8C1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FREM1Q5H8C1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FREM1Q5H8C1 AL359258.2-201ENST00000564063 1566 ntBASIC21.92■■□□□ 1.1
FREM1Q5H8C1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
FREM1Q5H8C1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FREM1Q5H8C1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
FREM1Q5H8C1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
FREM1Q5H8C1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.91■■□□□ 1.1
FREM1Q5H8C1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.91■■□□□ 1.1
FREM1Q5H8C1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.91■■□□□ 1.1
FREM1Q5H8C1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
FREM1Q5H8C1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
FREM1Q5H8C1 AL449106.1-201ENST00000608517 1980 ntBASIC21.9■■□□□ 1.1
FREM1Q5H8C1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
FREM1Q5H8C1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
FREM1Q5H8C1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.88■■□□□ 1.09
FREM1Q5H8C1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
FREM1Q5H8C1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
FREM1Q5H8C1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
FREM1Q5H8C1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FREM1Q5H8C1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FREM1Q5H8C1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.88■■□□□ 1.09
FREM1Q5H8C1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FREM1Q5H8C1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FREM1Q5H8C1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FREM1Q5H8C1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.87■■□□□ 1.09
FREM1Q5H8C1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.87■■□□□ 1.09
FREM1Q5H8C1 AC142086.6-201ENST00000621154 1765 ntBASIC21.86■■□□□ 1.09
FREM1Q5H8C1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.86■■□□□ 1.09
FREM1Q5H8C1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FREM1Q5H8C1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.86■■□□□ 1.09
FREM1Q5H8C1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.86■■□□□ 1.09
FREM1Q5H8C1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FREM1Q5H8C1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.85■■□□□ 1.09
FREM1Q5H8C1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.85■■□□□ 1.09
FREM1Q5H8C1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
FREM1Q5H8C1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FREM1Q5H8C1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FREM1Q5H8C1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FREM1Q5H8C1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FREM1Q5H8C1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
FREM1Q5H8C1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FREM1Q5H8C1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FREM1Q5H8C1 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.85■■□□□ 1.09
FREM1Q5H8C1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
FREM1Q5H8C1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
FREM1Q5H8C1 AC126177.7-201ENST00000547904 679 ntBASIC21.84■■□□□ 1.09
FREM1Q5H8C1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FREM1Q5H8C1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
FREM1Q5H8C1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
FREM1Q5H8C1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FREM1Q5H8C1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FREM1Q5H8C1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
FREM1Q5H8C1 KRT18P60-201ENST00000312876 1297 ntBASIC21.81■■□□□ 1.08
FREM1Q5H8C1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.81■■□□□ 1.08
FREM1Q5H8C1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FREM1Q5H8C1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FREM1Q5H8C1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
FREM1Q5H8C1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FREM1Q5H8C1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
FREM1Q5H8C1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.8■■□□□ 1.08
FREM1Q5H8C1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
FREM1Q5H8C1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FREM1Q5H8C1 NTF6A-201ENST00000591175 560 ntBASIC21.8■■□□□ 1.08
FREM1Q5H8C1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.79■■□□□ 1.08
FREM1Q5H8C1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
FREM1Q5H8C1 AC093536.1-201ENST00000569153 554 ntBASIC21.79■■□□□ 1.08
FREM1Q5H8C1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.79■■□□□ 1.08
FREM1Q5H8C1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FREM1Q5H8C1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.79■■□□□ 1.08
FREM1Q5H8C1 ECEL1P2-201ENST00000461596 1295 ntBASIC21.78■■□□□ 1.08
FREM1Q5H8C1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.78■■□□□ 1.08
FREM1Q5H8C1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
FREM1Q5H8C1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
FREM1Q5H8C1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
FREM1Q5H8C1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FREM1Q5H8C1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FREM1Q5H8C1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.77■■□□□ 1.08
FREM1Q5H8C1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FREM1Q5H8C1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FREM1Q5H8C1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
FREM1Q5H8C1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
FREM1Q5H8C1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.77■■□□□ 1.07
FREM1Q5H8C1 AL359504.2-201ENST00000605506 1601 ntBASIC21.76■■□□□ 1.07
FREM1Q5H8C1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.76■■□□□ 1.07
FREM1Q5H8C1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FREM1Q5H8C1 RAP2CP1-202ENST00000605179 643 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms