Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
USH1GQ495M9 AC007029.1-201ENST00000604183 313 ntBASIC28.58■■■□□ 2.17
USH1GQ495M9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
USH1GQ495M9 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.58■■■□□ 2.17
USH1GQ495M9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
USH1GQ495M9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
USH1GQ495M9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
USH1GQ495M9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.57■■■□□ 2.16
USH1GQ495M9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
USH1GQ495M9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
USH1GQ495M9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.56■■■□□ 2.16
USH1GQ495M9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.56■■■□□ 2.16
USH1GQ495M9 WHAMMP3-201ENST00000611636 1609 ntBASIC28.56■■■□□ 2.16
USH1GQ495M9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.55■■■□□ 2.16
USH1GQ495M9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
USH1GQ495M9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
USH1GQ495M9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.54■■■□□ 2.16
USH1GQ495M9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
USH1GQ495M9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
USH1GQ495M9 LINC01003-201ENST00000564834 1764 ntBASIC28.53■■■□□ 2.16
USH1GQ495M9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.53■■■□□ 2.16
USH1GQ495M9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
USH1GQ495M9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
USH1GQ495M9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
USH1GQ495M9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
USH1GQ495M9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.52■■■□□ 2.16
USH1GQ495M9 AC025884.2-201ENST00000553429 711 ntBASIC28.52■■■□□ 2.16
USH1GQ495M9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
USH1GQ495M9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
USH1GQ495M9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
USH1GQ495M9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
USH1GQ495M9 AC012354.3-201ENST00000623734 483 ntBASIC28.51■■■□□ 2.15
USH1GQ495M9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
USH1GQ495M9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
USH1GQ495M9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
USH1GQ495M9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.5■■■□□ 2.15
USH1GQ495M9 KRT18P60-201ENST00000312876 1297 ntBASIC28.5■■■□□ 2.15
USH1GQ495M9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
USH1GQ495M9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
USH1GQ495M9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.49■■■□□ 2.15
USH1GQ495M9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.49■■■□□ 2.15
USH1GQ495M9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
USH1GQ495M9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
USH1GQ495M9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
USH1GQ495M9 AL359504.2-201ENST00000605506 1601 ntBASIC28.47■■■□□ 2.15
USH1GQ495M9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
USH1GQ495M9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.46■■■□□ 2.15
USH1GQ495M9 AC009831.1-201ENST00000580420 1582 ntBASIC28.46■■■□□ 2.15
USH1GQ495M9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
USH1GQ495M9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
USH1GQ495M9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.45■■■□□ 2.15
USH1GQ495M9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.45■■■□□ 2.15
USH1GQ495M9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
USH1GQ495M9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
USH1GQ495M9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
USH1GQ495M9 AC133552.2-201ENST00000619106 1032 ntBASIC28.45■■■□□ 2.14
USH1GQ495M9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.45■■■□□ 2.14
USH1GQ495M9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
USH1GQ495M9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
USH1GQ495M9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
USH1GQ495M9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
USH1GQ495M9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.44■■■□□ 2.14
USH1GQ495M9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.43■■■□□ 2.14
USH1GQ495M9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
USH1GQ495M9 AL033527.3-201ENST00000566366 1196 ntBASIC28.43■■■□□ 2.14
USH1GQ495M9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
USH1GQ495M9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.42■■■□□ 2.14
USH1GQ495M9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.42■■■□□ 2.14
USH1GQ495M9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
USH1GQ495M9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
USH1GQ495M9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
USH1GQ495M9 RP9P-202ENST00000450133 1212 ntBASIC28.42■■■□□ 2.14
USH1GQ495M9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
USH1GQ495M9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.42■■■□□ 2.14
USH1GQ495M9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
USH1GQ495M9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
USH1GQ495M9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.41■■■□□ 2.14
USH1GQ495M9 AL592293.1-201ENST00000502889 1188 ntBASIC28.41■■■□□ 2.14
USH1GQ495M9 AC093536.1-201ENST00000569153 554 ntBASIC28.41■■■□□ 2.14
USH1GQ495M9 AC026202.3-201ENST00000600805 1127 ntBASIC28.41■■■□□ 2.14
USH1GQ495M9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
USH1GQ495M9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
USH1GQ495M9 AL449106.1-201ENST00000608517 1980 ntBASIC28.41■■■□□ 2.14
USH1GQ495M9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.4■■■□□ 2.14
USH1GQ495M9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
USH1GQ495M9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
USH1GQ495M9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
USH1GQ495M9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.39■■■□□ 2.14
USH1GQ495M9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.39■■■□□ 2.14
USH1GQ495M9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.39■■■□□ 2.14
USH1GQ495M9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.39■■■□□ 2.14
USH1GQ495M9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
USH1GQ495M9 BX255925.1-201ENST00000566954 1854 ntBASIC28.38■■■□□ 2.13
USH1GQ495M9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
USH1GQ495M9 AC142086.6-201ENST00000621154 1765 ntBASIC28.38■■■□□ 2.13
USH1GQ495M9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
USH1GQ495M9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
USH1GQ495M9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
USH1GQ495M9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
USH1GQ495M9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms