Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.21■■■□□ 2.43
RFX7Q2KHR2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
RFX7Q2KHR2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.2■■■□□ 2.43
RFX7Q2KHR2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
RFX7Q2KHR2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RFX7Q2KHR2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.19■■■□□ 2.42
RFX7Q2KHR2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
RFX7Q2KHR2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
RFX7Q2KHR2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RFX7Q2KHR2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RFX7Q2KHR2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.18■■■□□ 2.42
RFX7Q2KHR2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
RFX7Q2KHR2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RFX7Q2KHR2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.18■■■□□ 2.42
RFX7Q2KHR2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
RFX7Q2KHR2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RFX7Q2KHR2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RFX7Q2KHR2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
RFX7Q2KHR2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RFX7Q2KHR2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
RFX7Q2KHR2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
RFX7Q2KHR2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.17■■■□□ 2.42
RFX7Q2KHR2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RFX7Q2KHR2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RFX7Q2KHR2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.15■■■□□ 2.42
RFX7Q2KHR2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
RFX7Q2KHR2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RFX7Q2KHR2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
RFX7Q2KHR2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RFX7Q2KHR2 U85056.1-201ENST00000616429 682 ntBASIC30.15■■■□□ 2.42
RFX7Q2KHR2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RFX7Q2KHR2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
RFX7Q2KHR2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
RFX7Q2KHR2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
RFX7Q2KHR2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
RFX7Q2KHR2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.13■■■□□ 2.41
RFX7Q2KHR2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.12■■■□□ 2.41
RFX7Q2KHR2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RFX7Q2KHR2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
RFX7Q2KHR2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RFX7Q2KHR2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.12■■■□□ 2.41
RFX7Q2KHR2 AC012354.3-201ENST00000623734 483 ntBASIC30.12■■■□□ 2.41
RFX7Q2KHR2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.12■■■□□ 2.41
RFX7Q2KHR2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RFX7Q2KHR2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
RFX7Q2KHR2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.11■■■□□ 2.41
RFX7Q2KHR2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RFX7Q2KHR2 WHAMMP3-201ENST00000611636 1609 ntBASIC30.11■■■□□ 2.41
RFX7Q2KHR2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
RFX7Q2KHR2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RFX7Q2KHR2 ECEL1P2-201ENST00000461596 1295 ntBASIC30.1■■■□□ 2.41
RFX7Q2KHR2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RFX7Q2KHR2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RFX7Q2KHR2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RFX7Q2KHR2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
RFX7Q2KHR2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.09■■■□□ 2.41
RFX7Q2KHR2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RFX7Q2KHR2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
RFX7Q2KHR2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RFX7Q2KHR2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
RFX7Q2KHR2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
RFX7Q2KHR2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
RFX7Q2KHR2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
RFX7Q2KHR2 AC126177.7-201ENST00000547904 679 ntBASIC30.06■■■□□ 2.4
RFX7Q2KHR2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
RFX7Q2KHR2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
RFX7Q2KHR2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
RFX7Q2KHR2 AL449106.1-201ENST00000608517 1980 ntBASIC30.05■■■□□ 2.4
RFX7Q2KHR2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30.04■■■□□ 2.4
RFX7Q2KHR2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RFX7Q2KHR2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.04■■■□□ 2.4
RFX7Q2KHR2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.04■■■□□ 2.4
RFX7Q2KHR2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
RFX7Q2KHR2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RFX7Q2KHR2 AL121749.1-202ENST00000609313 2153 ntBASIC30.03■■■□□ 2.4
RFX7Q2KHR2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.03■■■□□ 2.4
RFX7Q2KHR2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RFX7Q2KHR2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RFX7Q2KHR2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RFX7Q2KHR2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RFX7Q2KHR2 KRT18P60-201ENST00000312876 1297 ntBASIC30.02■■■□□ 2.4
RFX7Q2KHR2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RFX7Q2KHR2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
RFX7Q2KHR2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RFX7Q2KHR2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RFX7Q2KHR2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RFX7Q2KHR2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RFX7Q2KHR2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
RFX7Q2KHR2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
RFX7Q2KHR2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC30■■■□□ 2.39
RFX7Q2KHR2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RFX7Q2KHR2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RFX7Q2KHR2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
RFX7Q2KHR2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.98■■■□□ 2.39
RFX7Q2KHR2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
RFX7Q2KHR2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RFX7Q2KHR2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.97■■■□□ 2.39
RFX7Q2KHR2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
RFX7Q2KHR2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.97■■■□□ 2.39
RFX7Q2KHR2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms