Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 WHAMMP3-201ENST00000611636 1609 ntBASIC30.47■■■□□ 2.47
ATP2B3Q16720 SMPD5-203ENST00000639008 1464 ntBASIC30.47■■■□□ 2.47
ATP2B3Q16720 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
ATP2B3Q16720 AC007029.1-201ENST00000604183 313 ntBASIC30.47■■■□□ 2.47
ATP2B3Q16720 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ATP2B3Q16720 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
ATP2B3Q16720 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
ATP2B3Q16720 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
ATP2B3Q16720 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
ATP2B3Q16720 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
ATP2B3Q16720 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
ATP2B3Q16720 AC025884.2-201ENST00000553429 711 ntBASIC30.45■■■□□ 2.47
ATP2B3Q16720 LINC01003-201ENST00000564834 1764 ntBASIC30.45■■■□□ 2.46
ATP2B3Q16720 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.45■■■□□ 2.46
ATP2B3Q16720 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.44■■■□□ 2.46
ATP2B3Q16720 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ATP2B3Q16720 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.44■■■□□ 2.46
ATP2B3Q16720 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ATP2B3Q16720 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.44■■■□□ 2.46
ATP2B3Q16720 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ATP2B3Q16720 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ATP2B3Q16720 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
ATP2B3Q16720 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.43■■■□□ 2.46
ATP2B3Q16720 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.43■■■□□ 2.46
ATP2B3Q16720 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.43■■■□□ 2.46
ATP2B3Q16720 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
ATP2B3Q16720 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.42■■■□□ 2.46
ATP2B3Q16720 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
ATP2B3Q16720 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ATP2B3Q16720 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.41■■■□□ 2.46
ATP2B3Q16720 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
ATP2B3Q16720 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
ATP2B3Q16720 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
ATP2B3Q16720 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
ATP2B3Q16720 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.39■■■□□ 2.46
ATP2B3Q16720 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
ATP2B3Q16720 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
ATP2B3Q16720 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
ATP2B3Q16720 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.38■■■□□ 2.45
ATP2B3Q16720 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
ATP2B3Q16720 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
ATP2B3Q16720 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
ATP2B3Q16720 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
ATP2B3Q16720 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.37■■■□□ 2.45
ATP2B3Q16720 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30.37■■■□□ 2.45
ATP2B3Q16720 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ATP2B3Q16720 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
ATP2B3Q16720 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ATP2B3Q16720 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.36■■■□□ 2.45
ATP2B3Q16720 KRT18P60-201ENST00000312876 1297 ntBASIC30.35■■■□□ 2.45
ATP2B3Q16720 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
ATP2B3Q16720 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.35■■■□□ 2.45
ATP2B3Q16720 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
ATP2B3Q16720 AL359504.2-201ENST00000605506 1601 ntBASIC30.35■■■□□ 2.45
ATP2B3Q16720 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
ATP2B3Q16720 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
ATP2B3Q16720 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ATP2B3Q16720 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.34■■■□□ 2.45
ATP2B3Q16720 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
ATP2B3Q16720 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
ATP2B3Q16720 AC012354.3-201ENST00000623734 483 ntBASIC30.33■■■□□ 2.45
ATP2B3Q16720 AC009831.1-201ENST00000580420 1582 ntBASIC30.32■■■□□ 2.45
ATP2B3Q16720 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
ATP2B3Q16720 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
ATP2B3Q16720 AC142086.6-201ENST00000621154 1765 ntBASIC30.32■■■□□ 2.44
ATP2B3Q16720 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
ATP2B3Q16720 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
ATP2B3Q16720 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.32■■■□□ 2.44
ATP2B3Q16720 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
ATP2B3Q16720 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
ATP2B3Q16720 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.31■■■□□ 2.44
ATP2B3Q16720 BX255925.1-201ENST00000566954 1854 ntBASIC30.31■■■□□ 2.44
ATP2B3Q16720 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
ATP2B3Q16720 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ATP2B3Q16720 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
ATP2B3Q16720 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.3■■■□□ 2.44
ATP2B3Q16720 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.3■■■□□ 2.44
ATP2B3Q16720 RP9P-202ENST00000450133 1212 ntBASIC30.3■■■□□ 2.44
ATP2B3Q16720 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
ATP2B3Q16720 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.29■■■□□ 2.44
ATP2B3Q16720 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
ATP2B3Q16720 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.29■■■□□ 2.44
ATP2B3Q16720 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC30.29■■■□□ 2.44
ATP2B3Q16720 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ATP2B3Q16720 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.29■■■□□ 2.44
ATP2B3Q16720 AC026202.3-201ENST00000600805 1127 ntBASIC30.29■■■□□ 2.44
ATP2B3Q16720 AC133552.2-201ENST00000619106 1032 ntBASIC30.29■■■□□ 2.44
ATP2B3Q16720 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC30.29■■■□□ 2.44
ATP2B3Q16720 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
ATP2B3Q16720 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
ATP2B3Q16720 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATP2B3Q16720 AL449106.1-201ENST00000608517 1980 ntBASIC30.28■■■□□ 2.44
ATP2B3Q16720 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ATP2B3Q16720 AC093536.1-201ENST00000569153 554 ntBASIC30.28■■■□□ 2.44
ATP2B3Q16720 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATP2B3Q16720 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATP2B3Q16720 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
ATP2B3Q16720 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC30.27■■■□□ 2.44
ATP2B3Q16720 MIR3960-201ENST00000583311 91 ntBASIC30.27■■■□□ 2.44
ATP2B3Q16720 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.27■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 214.6 ms