Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL20P78556 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL20P78556 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL20P78556 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL20P78556 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CCL20P78556 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL20P78556 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL20P78556 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CCL20P78556 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCL20P78556 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CCL20P78556 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.49■□□□□ 0.71
CCL20P78556 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL20P78556 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.48■□□□□ 0.71
CCL20P78556 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL20P78556 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCL20P78556 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL20P78556 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCL20P78556 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCL20P78556 AP004609.3-201ENST00000610705 1884 ntBASIC19.47■□□□□ 0.71
CCL20P78556 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL20P78556 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.47■□□□□ 0.71
CCL20P78556 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.47■□□□□ 0.71
CCL20P78556 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL20P78556 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL20P78556 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.46■□□□□ 0.71
CCL20P78556 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL20P78556 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL20P78556 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.46■□□□□ 0.71
CCL20P78556 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CCL20P78556 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.46■□□□□ 0.71
CCL20P78556 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCL20P78556 AL139125.2-201ENST00000623134 1869 ntBASIC19.45■□□□□ 0.7
CCL20P78556 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL20P78556 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL20P78556 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.45■□□□□ 0.7
CCL20P78556 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL20P78556 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCL20P78556 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCL20P78556 AC142381.3-201ENST00000568208 1670 ntBASIC19.45■□□□□ 0.7
CCL20P78556 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.45■□□□□ 0.7
CCL20P78556 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.45■□□□□ 0.7
CCL20P78556 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.44■□□□□ 0.7
CCL20P78556 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL20P78556 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL20P78556 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL20P78556 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL20P78556 AC012676.1-201ENST00000574705 1949 ntBASIC19.44■□□□□ 0.7
CCL20P78556 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL20P78556 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL20P78556 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL20P78556 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL20P78556 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL20P78556 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL20P78556 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL20P78556 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL20P78556 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL20P78556 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCL20P78556 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL20P78556 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CCL20P78556 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL20P78556 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCL20P78556 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL20P78556 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL20P78556 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL20P78556 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCL20P78556 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCL20P78556 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.4■□□□□ 0.7
CCL20P78556 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL20P78556 AC138932.3-201ENST00000567634 1902 ntBASIC19.39■□□□□ 0.7
CCL20P78556 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCL20P78556 AL133380.1-201ENST00000506013 324 ntBASIC19.39■□□□□ 0.69
CCL20P78556 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCL20P78556 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.39■□□□□ 0.69
CCL20P78556 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.39■□□□□ 0.69
CCL20P78556 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCL20P78556 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL20P78556 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCL20P78556 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCL20P78556 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL20P78556 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCL20P78556 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.37■□□□□ 0.69
CCL20P78556 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL20P78556 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL20P78556 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.37■□□□□ 0.69
CCL20P78556 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL20P78556 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CCL20P78556 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCL20P78556 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL20P78556 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL20P78556 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.36■□□□□ 0.69
CCL20P78556 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL20P78556 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CCL20P78556 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.36■□□□□ 0.69
CCL20P78556 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCL20P78556 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CCL20P78556 ZNRF2P1-201ENST00000441407 443 ntBASIC19.36■□□□□ 0.69
CCL20P78556 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCL20P78556 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL20P78556 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
CCL20P78556 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms