Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.28■■□□□ 1.32
RPP38P78345 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
RPP38P78345 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPP38P78345 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.27■■□□□ 1.32
RPP38P78345 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.27■■□□□ 1.32
RPP38P78345 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPP38P78345 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
RPP38P78345 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
RPP38P78345 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RPP38P78345 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RPP38P78345 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RPP38P78345 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RPP38P78345 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RPP38P78345 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
RPP38P78345 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RPP38P78345 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RPP38P78345 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.25■■□□□ 1.31
RPP38P78345 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RPP38P78345 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RPP38P78345 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RPP38P78345 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.24■■□□□ 1.31
RPP38P78345 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.24■■□□□ 1.31
RPP38P78345 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RPP38P78345 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.24■■□□□ 1.31
RPP38P78345 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RPP38P78345 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RPP38P78345 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RPP38P78345 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RPP38P78345 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RPP38P78345 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RPP38P78345 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.22■■□□□ 1.31
RPP38P78345 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RPP38P78345 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RPP38P78345 AC091060.1-201ENST00000623524 1766 ntBASIC23.22■■□□□ 1.31
RPP38P78345 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RPP38P78345 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPP38P78345 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPP38P78345 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
RPP38P78345 AP002414.2-202ENST00000590929 1450 ntBASIC23.21■■□□□ 1.31
RPP38P78345 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RPP38P78345 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.2■■□□□ 1.3
RPP38P78345 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RPP38P78345 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
RPP38P78345 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RPP38P78345 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
RPP38P78345 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RPP38P78345 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RPP38P78345 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RPP38P78345 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RPP38P78345 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RPP38P78345 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RPP38P78345 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RPP38P78345 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RPP38P78345 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
RPP38P78345 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RPP38P78345 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RPP38P78345 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RPP38P78345 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RPP38P78345 AC148477.6-201ENST00000623746 465 ntBASIC23.18■■□□□ 1.3
RPP38P78345 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RPP38P78345 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RPP38P78345 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RPP38P78345 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RPP38P78345 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RPP38P78345 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.17■■□□□ 1.3
RPP38P78345 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RPP38P78345 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RPP38P78345 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RPP38P78345 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.16■■□□□ 1.3
RPP38P78345 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.16■■□□□ 1.3
RPP38P78345 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RPP38P78345 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
RPP38P78345 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RPP38P78345 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.15■■□□□ 1.3
RPP38P78345 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RPP38P78345 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RPP38P78345 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
RPP38P78345 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RPP38P78345 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RPP38P78345 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RPP38P78345 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
RPP38P78345 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RPP38P78345 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
RPP38P78345 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RPP38P78345 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RPP38P78345 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RPP38P78345 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPP38P78345 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.11■■□□□ 1.29
RPP38P78345 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.11■■□□□ 1.29
RPP38P78345 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.11■■□□□ 1.29
RPP38P78345 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
RPP38P78345 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
RPP38P78345 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.1■■□□□ 1.29
RPP38P78345 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RPP38P78345 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.09■■□□□ 1.29
RPP38P78345 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.09■■□□□ 1.29
RPP38P78345 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPP38P78345 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPP38P78345 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPP38P78345 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms