Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA52P62987 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA52P62987 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
UBA52P62987 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBA52P62987 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA52P62987 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA52P62987 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
UBA52P62987 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA52P62987 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
UBA52P62987 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.03■□□□□ 0.96
UBA52P62987 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBA52P62987 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBA52P62987 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.03■□□□□ 0.96
UBA52P62987 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBA52P62987 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.02■□□□□ 0.96
UBA52P62987 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.01■□□□□ 0.95
UBA52P62987 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBA52P62987 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBA52P62987 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBA52P62987 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
UBA52P62987 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
UBA52P62987 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21■□□□□ 0.95
UBA52P62987 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
UBA52P62987 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21■□□□□ 0.95
UBA52P62987 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21■□□□□ 0.95
UBA52P62987 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
UBA52P62987 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
UBA52P62987 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA52P62987 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBA52P62987 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.98■□□□□ 0.95
UBA52P62987 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBA52P62987 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.98■□□□□ 0.95
UBA52P62987 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBA52P62987 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBA52P62987 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.97■□□□□ 0.95
UBA52P62987 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.97■□□□□ 0.95
UBA52P62987 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.96■□□□□ 0.95
UBA52P62987 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBA52P62987 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBA52P62987 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBA52P62987 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
UBA52P62987 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBA52P62987 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBA52P62987 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBA52P62987 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.94■□□□□ 0.94
UBA52P62987 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.94■□□□□ 0.94
UBA52P62987 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.94■□□□□ 0.94
UBA52P62987 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBA52P62987 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBA52P62987 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBA52P62987 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.93■□□□□ 0.94
UBA52P62987 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.93■□□□□ 0.94
UBA52P62987 AC145676.1-201ENST00000514988 2004 ntBASIC20.93■□□□□ 0.94
UBA52P62987 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBA52P62987 RARRES2P2-201ENST00000394842 485 ntBASIC20.92■□□□□ 0.94
UBA52P62987 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBA52P62987 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBA52P62987 LINC01003-201ENST00000564834 1764 ntBASIC20.92■□□□□ 0.94
UBA52P62987 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBA52P62987 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.91■□□□□ 0.94
UBA52P62987 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBA52P62987 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBA52P62987 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBA52P62987 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.91■□□□□ 0.94
UBA52P62987 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.91■□□□□ 0.94
UBA52P62987 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBA52P62987 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
UBA52P62987 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.91■□□□□ 0.94
UBA52P62987 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBA52P62987 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBA52P62987 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBA52P62987 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBA52P62987 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBA52P62987 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.9■□□□□ 0.94
UBA52P62987 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.9■□□□□ 0.94
UBA52P62987 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBA52P62987 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
UBA52P62987 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBA52P62987 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBA52P62987 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBA52P62987 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBA52P62987 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBA52P62987 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
UBA52P62987 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms