Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CMC4P56277 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CMC4P56277 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CMC4P56277 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CMC4P56277 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CMC4P56277 ECEL1P2-201ENST00000461596 1295 ntBASIC18.44■□□□□ 0.54
CMC4P56277 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.44■□□□□ 0.54
CMC4P56277 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.44■□□□□ 0.54
CMC4P56277 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CMC4P56277 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CMC4P56277 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CMC4P56277 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CMC4P56277 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CMC4P56277 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CMC4P56277 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.42■□□□□ 0.54
CMC4P56277 RNF126P1-201ENST00000567452 1320 ntBASIC18.42■□□□□ 0.54
CMC4P56277 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CMC4P56277 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CMC4P56277 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CMC4P56277 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CMC4P56277 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CMC4P56277 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CMC4P56277 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.41■□□□□ 0.54
CMC4P56277 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CMC4P56277 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.41■□□□□ 0.54
CMC4P56277 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.41■□□□□ 0.54
CMC4P56277 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CMC4P56277 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.4■□□□□ 0.54
CMC4P56277 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.4■□□□□ 0.54
CMC4P56277 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CMC4P56277 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CMC4P56277 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CMC4P56277 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CMC4P56277 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CMC4P56277 AC092296.2-201ENST00000589470 999 ntBASIC18.38■□□□□ 0.53
CMC4P56277 HSD17B1P1-201ENST00000590052 955 ntBASIC18.38■□□□□ 0.53
CMC4P56277 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CMC4P56277 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CMC4P56277 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CMC4P56277 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CMC4P56277 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.37■□□□□ 0.53
CMC4P56277 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.37■□□□□ 0.53
CMC4P56277 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CMC4P56277 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CMC4P56277 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CMC4P56277 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CMC4P56277 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CMC4P56277 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CMC4P56277 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.36■□□□□ 0.53
CMC4P56277 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.36■□□□□ 0.53
CMC4P56277 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.36■□□□□ 0.53
CMC4P56277 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CMC4P56277 SMPD5-203ENST00000639008 1464 ntBASIC18.35■□□□□ 0.53
CMC4P56277 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CMC4P56277 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CMC4P56277 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CMC4P56277 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CMC4P56277 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.35■□□□□ 0.53
CMC4P56277 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CMC4P56277 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CMC4P56277 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CMC4P56277 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.34■□□□□ 0.53
CMC4P56277 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.33■□□□□ 0.53
CMC4P56277 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CMC4P56277 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CMC4P56277 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.33■□□□□ 0.52
CMC4P56277 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CMC4P56277 MIR3960-201ENST00000583311 91 ntBASIC18.33■□□□□ 0.52
CMC4P56277 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.33■□□□□ 0.52
CMC4P56277 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CMC4P56277 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CMC4P56277 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMC4P56277 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMC4P56277 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CMC4P56277 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CMC4P56277 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMC4P56277 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.32■□□□□ 0.52
CMC4P56277 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CMC4P56277 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMC4P56277 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CMC4P56277 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMC4P56277 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMC4P56277 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.31■□□□□ 0.52
CMC4P56277 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CMC4P56277 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CMC4P56277 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CMC4P56277 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.3■□□□□ 0.52
CMC4P56277 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.3■□□□□ 0.52
CMC4P56277 AL449106.1-201ENST00000608517 1980 ntBASIC18.3■□□□□ 0.52
CMC4P56277 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.3■□□□□ 0.52
CMC4P56277 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CMC4P56277 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CMC4P56277 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CMC4P56277 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CMC4P56277 AC142472.1-201ENST00000612013 1741 ntBASIC18.29■□□□□ 0.52
CMC4P56277 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CMC4P56277 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CMC4P56277 AC025884.2-201ENST00000553429 711 ntBASIC18.29■□□□□ 0.52
CMC4P56277 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CMC4P56277 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms