Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.75■■□□□ 1.71
CDH6P55285 AC148477.6-201ENST00000623746 465 ntBASIC25.75■■□□□ 1.71
CDH6P55285 AP004609.3-201ENST00000610705 1884 ntBASIC25.74■■□□□ 1.71
CDH6P55285 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDH6P55285 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.74■■□□□ 1.71
CDH6P55285 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDH6P55285 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.73■■□□□ 1.71
CDH6P55285 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CDH6P55285 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CDH6P55285 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CDH6P55285 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDH6P55285 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDH6P55285 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.71■■□□□ 1.71
CDH6P55285 AC016575.1-201ENST00000607026 382 ntBASIC25.71■■□□□ 1.71
CDH6P55285 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDH6P55285 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CDH6P55285 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CDH6P55285 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.7■■□□□ 1.71
CDH6P55285 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.7■■□□□ 1.7
CDH6P55285 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.7■■□□□ 1.7
CDH6P55285 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDH6P55285 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDH6P55285 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDH6P55285 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDH6P55285 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDH6P55285 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.68■■□□□ 1.7
CDH6P55285 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDH6P55285 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDH6P55285 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.68■■□□□ 1.7
CDH6P55285 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CDH6P55285 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.67■■□□□ 1.7
CDH6P55285 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
CDH6P55285 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.67■■□□□ 1.7
CDH6P55285 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDH6P55285 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CDH6P55285 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDH6P55285 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.66■■□□□ 1.7
CDH6P55285 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDH6P55285 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.66■■□□□ 1.7
CDH6P55285 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDH6P55285 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDH6P55285 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDH6P55285 AC142472.1-201ENST00000612013 1741 ntBASIC25.66■■□□□ 1.7
CDH6P55285 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
CDH6P55285 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.65■■□□□ 1.7
CDH6P55285 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.65■■□□□ 1.7
CDH6P55285 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.65■■□□□ 1.7
CDH6P55285 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDH6P55285 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.64■■□□□ 1.7
CDH6P55285 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CDH6P55285 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.63■■□□□ 1.69
CDH6P55285 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDH6P55285 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CDH6P55285 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.63■■□□□ 1.69
CDH6P55285 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDH6P55285 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.62■■□□□ 1.69
CDH6P55285 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
CDH6P55285 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.62■■□□□ 1.69
CDH6P55285 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
CDH6P55285 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDH6P55285 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDH6P55285 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDH6P55285 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.61■■□□□ 1.69
CDH6P55285 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDH6P55285 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDH6P55285 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDH6P55285 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.61■■□□□ 1.69
CDH6P55285 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDH6P55285 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.61■■□□□ 1.69
CDH6P55285 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDH6P55285 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CDH6P55285 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDH6P55285 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDH6P55285 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDH6P55285 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDH6P55285 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.59■■□□□ 1.69
CDH6P55285 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CDH6P55285 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDH6P55285 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CDH6P55285 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
CDH6P55285 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.58■■□□□ 1.69
CDH6P55285 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDH6P55285 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.58■■□□□ 1.69
CDH6P55285 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDH6P55285 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDH6P55285 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.56■■□□□ 1.68
CDH6P55285 AL359258.2-201ENST00000564063 1566 ntBASIC25.56■■□□□ 1.68
CDH6P55285 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDH6P55285 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDH6P55285 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.56■■□□□ 1.68
CDH6P55285 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDH6P55285 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.55■■□□□ 1.68
CDH6P55285 MIR639-201ENST00000384974 98 ntBASIC25.55■■□□□ 1.68
CDH6P55285 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CDH6P55285 AC091060.1-201ENST00000623524 1766 ntBASIC25.54■■□□□ 1.68
CDH6P55285 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDH6P55285 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.54■■□□□ 1.68
CDH6P55285 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CDH6P55285 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.54■■□□□ 1.68
CDH6P55285 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms