Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 AIM2YAL049C 741 nt6.88□□□□□ -1.31
UPF3P48412 ATP23YNR020C 813 nt6.88□□□□□ -1.31
UPF3P48412 PAP2YOL115W 1755 nt6.87□□□□□ -1.31
UPF3P48412 ENP1YBR247C 1452 nt6.87□□□□□ -1.31
UPF3P48412 PAC10YGR078C 600 nt6.87□□□□□ -1.31
UPF3P48412 RPL43AYPR043W 279 nt6.87□□□□□ -1.31
UPF3P48412 SDH8YBR269C 417 nt6.87□□□□□ -1.31
UPF3P48412 ERG27YLR100W 1044 nt6.86□□□□□ -1.31
UPF3P48412 NPL6YMR091C 1308 nt6.85□□□□□ -1.31
UPF3P48412 YIP4YGL198W 708 nt6.85□□□□□ -1.31
UPF3P48412 FZF1YGL254W 900 nt6.85□□□□□ -1.31
UPF3P48412 YPR127WYPR127W 1038 nt6.85□□□□□ -1.31
UPF3P48412 ADE17YMR120C 1779 nt6.85□□□□□ -1.31
UPF3P48412 MFG1YDL233W 1377 nt6.84□□□□□ -1.31
UPF3P48412 VTS1YOR359W 1572 nt6.84□□□□□ -1.31
UPF3P48412 YGR068W-AYGR068W-A 96 nt6.84□□□□□ -1.31
UPF3P48412 PAM17YKR065C 594 nt6.84□□□□□ -1.31
UPF3P48412 DRS1YLL008W 2259 nt6.84□□□□□ -1.31
UPF3P48412 IME2YJL106W 1938 nt6.84□□□□□ -1.32
UPF3P48412 GUF1YLR289W 1938 nt6.84□□□□□ -1.32
UPF3P48412 YFR006WYFR006W 1608 nt6.83□□□□□ -1.32
UPF3P48412 PRP2YNR011C 2631 nt6.83□□□□□ -1.32
UPF3P48412 AIM3YBR108W 2844 nt6.83□□□□□ -1.32
UPF3P48412 TIF2YJL138C 1188 nt6.83□□□□□ -1.32
UPF3P48412 TIF1YKR059W 1188 nt6.83□□□□□ -1.32
UPF3P48412 RTC4YNL254C 1206 nt6.83□□□□□ -1.32
UPF3P48412 FET4YMR319C 1659 nt6.83□□□□□ -1.32
UPF3P48412 TRR1YDR353W 960 nt6.82□□□□□ -1.32
UPF3P48412 HHY1YEL059W 309 nt6.82□□□□□ -1.32
UPF3P48412 DPM1YPR183W 804 nt6.82□□□□□ -1.32
UPF3P48412 TDP1YBR223C 1635 nt6.82□□□□□ -1.32
UPF3P48412 MPA43YNL249C 1629 nt6.81□□□□□ -1.32
UPF3P48412 DMC1YER179W 1005 nt6.81□□□□□ -1.32
UPF3P48412 YGR139WYGR139W 339 nt6.81□□□□□ -1.32
UPF3P48412 YML122CYML122C 381 nt6.81□□□□□ -1.32
UPF3P48412 PTH2YBL057C 627 nt6.81□□□□□ -1.32
UPF3P48412 MCH2YKL221W 1422 nt6.81□□□□□ -1.32
UPF3P48412 UME1YPL139C 1383 nt6.81□□□□□ -1.32
UPF3P48412 DPB2YPR175W 2070 nt6.8□□□□□ -1.32
UPF3P48412 PUP2YGR253C 783 nt6.8□□□□□ -1.32
UPF3P48412 CDC11YJR076C 1248 nt6.8□□□□□ -1.32
UPF3P48412 SWP1YMR149W 861 nt6.8□□□□□ -1.32
UPF3P48412 RPR1RPR1 369 nt6.8□□□□□ -1.32
UPF3P48412 YPQ1YOL092W 927 nt6.8□□□□□ -1.32
UPF3P48412 SNT309YPR101W 528 nt6.8□□□□□ -1.32
UPF3P48412 DEF1YKL054C 2217 nt6.79□□□□□ -1.32
UPF3P48412 YPQ2YDR352W 954 nt6.79□□□□□ -1.32
UPF3P48412 THR1YHR025W 1074 nt6.79□□□□□ -1.32
UPF3P48412 MIX17YMR002W 471 nt6.79□□□□□ -1.32
UPF3P48412 PRE5YMR314W 705 nt6.79□□□□□ -1.32
UPF3P48412 YPL067CYPL067C 597 nt6.79□□□□□ -1.32
UPF3P48412 MKK1YOR231W 1527 nt6.79□□□□□ -1.32
UPF3P48412 SRF1YDL133W 1314 nt6.78□□□□□ -1.32
UPF3P48412 IES1YFL013C 2079 nt6.78□□□□□ -1.32
UPF3P48412 MTR3YGR158C 753 nt6.78□□□□□ -1.32
UPF3P48412 YML079WYML079W 606 nt6.78□□□□□ -1.32
UPF3P48412 PZF1YPR186C 1290 nt6.78□□□□□ -1.32
UPF3P48412 MSG5YNL053W 1470 nt6.78□□□□□ -1.32
UPF3P48412 NFS1YCL017C 1494 nt6.78□□□□□ -1.32
UPF3P48412 AMN1YBR158W 1650 nt6.77□□□□□ -1.32
UPF3P48412 DLD1YDL174C 1764 nt6.77□□□□□ -1.33
UPF3P48412 SSC1YJR045C 1965 nt6.77□□□□□ -1.33
UPF3P48412 LAG2YOL025W 1983 nt6.77□□□□□ -1.33
UPF3P48412 PPS1YBR276C 2424 nt6.77□□□□□ -1.33
UPF3P48412 YIR017W-AYIR017W-A 600 nt6.77□□□□□ -1.33
UPF3P48412 IRC5YFR038W 2562 nt6.76□□□□□ -1.33
UPF3P48412 ARC35YNR035C 1029 nt6.76□□□□□ -1.33
UPF3P48412 MBF1YOR298C-A 456 nt6.76□□□□□ -1.33
UPF3P48412 SLD7YOR060C 774 nt6.75□□□□□ -1.33
UPF3P48412 SGE1YPR198W 1632 nt6.75□□□□□ -1.33
UPF3P48412 CTA1YDR256C 1548 nt6.75□□□□□ -1.33
UPF3P48412 KIN1YDR122W 3195 nt6.74□□□□□ -1.33
UPF3P48412 SEC23YPR181C 2307 nt6.74□□□□□ -1.33
UPF3P48412 YOR389WYOR389W 1875 nt6.74□□□□□ -1.33
UPF3P48412 EFM1YHL039W 1758 nt6.74□□□□□ -1.33
UPF3P48412 ERG12YMR208W 1332 nt6.74□□□□□ -1.33
UPF3P48412 TAH11YJR046W 1815 nt6.73□□□□□ -1.33
UPF3P48412 NAF1YNL124W 1479 nt6.73□□□□□ -1.33
UPF3P48412 HPT1YDR399W 666 nt6.73□□□□□ -1.33
UPF3P48412 MPE1YKL059C 1326 nt6.73□□□□□ -1.33
UPF3P48412 TUB1YML085C 1344 nt6.73□□□□□ -1.33
UPF3P48412 PAP1YKR002W 1707 nt6.73□□□□□ -1.33
UPF3P48412 CYB2YML054C 1776 nt6.72□□□□□ -1.33
UPF3P48412 YCR049CYCR049C 447 nt6.72□□□□□ -1.33
UPF3P48412 YAL019W-AYAL019W-A 570 nt6.72□□□□□ -1.33
UPF3P48412 YAL045CYAL045C 309 nt6.72□□□□□ -1.33
UPF3P48412 LAT1YNL071W 1449 nt6.72□□□□□ -1.33
UPF3P48412 CEM1YER061C 1329 nt6.72□□□□□ -1.33
UPF3P48412 ATG23YLR431C 1362 nt6.71□□□□□ -1.33
UPF3P48412 YHR145CYHR145C 357 nt6.71□□□□□ -1.34
UPF3P48412 CYS3YAL012W 1185 nt6.7□□□□□ -1.34
UPF3P48412 NTG1YAL015C 1200 nt6.7□□□□□ -1.34
UPF3P48412 HBN1YCL026C-B 582 nt6.7□□□□□ -1.34
UPF3P48412 CCT3YJL014W 1605 nt6.69□□□□□ -1.34
UPF3P48412 DML1YMR211W 1428 nt6.69□□□□□ -1.34
UPF3P48412 ERS1YCR075C 783 nt6.69□□□□□ -1.34
UPF3P48412 MRPL28YDR462W 444 nt6.69□□□□□ -1.34
UPF3P48412 DFR1YOR236W 636 nt6.69□□□□□ -1.34
UPF3P48412 CST26YBR042C 1194 nt6.69□□□□□ -1.34
UPF3P48412 MSS116YDR194C 1995 nt6.69□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 69.3 ms