RNA–Protein interactions for RNA: YPR181C

SEC23, Transcript of GTPase-activating protein, stimulates the GTPase activity of Sar1p, yeastyeast

Gene SEC23, Length 2,307 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC23YPR181C SGS1P35187 1447 aa10.71□□□□□ -0.7
SEC23YPR181C SPA2P23201 1466 aaKnown RBP10.62□□□□□ -0.71
SEC23YPR181C SSN2P38931 1420 aa10.53□□□□□ -0.72
SEC23YPR181C DRS1P32892 752 aaKnown RBP10.29□□□□□ -0.76
SEC23YPR181C INO80P53115 1489 aa10.15□□□□□ -0.78
SEC23YPR181C SKI3P17883 1432 aaKnown RBP10.08□□□□□ -0.8
SEC23YPR181C NOP2P40991 618 aaKnown RBP10□□□□□ -0.81
SEC23YPR181C NSR1P27476 414 aaKnown RBP RIP-Chip data9.94□□□□□ -0.82not detected
SEC23YPR181C TCB3Q03640 1545 aaKnown RBP9.79□□□□□ -0.84
SEC23YPR181C BFR2Q06631 534 aaKnown RBP9.78□□□□□ -0.84
SEC23YPR181C MMS22Q06164 1454 aa9.76□□□□□ -0.85
SEC23YPR181C RSE1Q04693 1361 aaKnown RBP9.73□□□□□ -0.85
SEC23YPR181C CHD1P32657 1468 aa9.68□□□□□ -0.86
SEC23YPR181C HSL1P34244 1518 aa9.63□□□□□ -0.87
SEC23YPR181C XRN1P22147 1528 aaKnown RBP9.6□□□□□ -0.87
SEC23YPR181C TY1B-DR4Q07793 1604 aa9.6□□□□□ -0.87
SEC23YPR181C SPT6P23615 1451 aaKnown RBP9.59□□□□□ -0.87
SEC23YPR181C SAS10Q12136 610 aaPredicted RBP9.55□□□□□ -0.88
SEC23YPR181C UFD4P33202 1483 aa9.54□□□□□ -0.88
SEC23YPR181C HIR3P47171 1648 aa9.5□□□□□ -0.89
SEC23YPR181C TRM732Q03496 1420 aa9.48□□□□□ -0.89
SEC23YPR181C TAF2P23255 1407 aa9.48□□□□□ -0.89
SEC23YPR181C REV3P14284 1504 aa9.45□□□□□ -0.9
SEC23YPR181C ENP1P38333 483 aaKnown RBP9.43□□□□□ -0.9
SEC23YPR181C IKI3Q06706 1349 aaKnown RBP9.43□□□□□ -0.9
SEC23YPR181C THO2P53552 1597 aaKnown RBP9.39□□□□□ -0.91
SEC23YPR181C STU1P38198 1513 aa9.37□□□□□ -0.91
SEC23YPR181C SSK2P53599 1579 aa9.36□□□□□ -0.91
SEC23YPR181C SPP41P38904 1435 aa9.36□□□□□ -0.91
SEC23YPR181C MYO2P19524 1574 aaKnown RBP9.36□□□□□ -0.91
SEC23YPR181C YTA7P40340 1379 aa9.35□□□□□ -0.91
SEC23YPR181C POL5P39985 1022 aaKnown RBP9.34□□□□□ -0.91
SEC23YPR181C SIN3P22579 1536 aa9.34□□□□□ -0.91
SEC23YPR181C SSM4P40318 1319 aa9.34□□□□□ -0.91
SEC23YPR181C BPT1P14772 1559 aa9.33□□□□□ -0.92
SEC23YPR181C MON2P48563 1636 aaPredicted RBP9.32□□□□□ -0.92
SEC23YPR181C SPT7P35177 1332 aa9.31□□□□□ -0.92
SEC23YPR181C POL1P13382 1468 aa9.3□□□□□ -0.92
SEC23YPR181C SCC2Q04002 1493 aa9.29□□□□□ -0.92
SEC23YPR181C CAB3P36076 571 aa9.25□□□□□ -0.93
SEC23YPR181C STH1P32597 1359 aa9.24□□□□□ -0.93
SEC23YPR181C ESP1Q03018 1630 aa9.24□□□□□ -0.93
SEC23YPR181C RTT106P40161 455 aa9.23□□□□□ -0.93
SEC23YPR181C EBP2P36049 427 aaKnown RBP9.21□□□□□ -0.93
SEC23YPR181C YPR148CQ06523 435 aa9.21□□□□□ -0.93
SEC23YPR181C PRS1P32895 427 aaKnown RBP9.18□□□□□ -0.94
SEC23YPR181C NUP170P38181 1502 aa9.17□□□□□ -0.94
SEC23YPR181C SEC3P33332 1336 aaKnown RBP9.17□□□□□ -0.94
SEC23YPR181C SWR1Q05471 1514 aa9.15□□□□□ -0.95
SEC23YPR181C ECM5Q03214 1411 aa9.15□□□□□ -0.95
SEC23YPR181C IFH1P39520 1085 aa9.14□□□□□ -0.95
SEC23YPR181C TAF7Q05021 590 aa9.14□□□□□ -0.95
SEC23YPR181C DNA2P38859 1522 aa9.13□□□□□ -0.95
SEC23YPR181C BUD4P47136 1447 aa9.13□□□□□ -0.95
SEC23YPR181C LEU3P08638 886 aa9.13□□□□□ -0.95
SEC23YPR181C MYO4P32492 1471 aa9.11□□□□□ -0.95
SEC23YPR181C YOR1P53049 1477 aa9.11□□□□□ -0.95
SEC23YPR181C PAN1P32521 1480 aa9.1□□□□□ -0.95
SEC23YPR181C YPK9Q12697 1472 aa9.09□□□□□ -0.95
SEC23YPR181C RKR1Q04781 1562 aa9.08□□□□□ -0.96
SEC23YPR181C SNQ2P32568 1501 aaKnown RBP9.08□□□□□ -0.96
SEC23YPR181C SMC4Q12267 1418 aa9.06□□□□□ -0.96
SEC23YPR181C PDR10P51533 1564 aa9.06□□□□□ -0.96
SEC23YPR181C TSC11P40061 1430 aa9.04□□□□□ -0.96
SEC23YPR181C GEA1P47102 1408 aaPredicted RBP9.04□□□□□ -0.96
SEC23YPR181C YCF1P39109 1515 aaKnown RBP9□□□□□ -0.97
SEC23YPR181C PSD2P53037 1138 aaKnown RBP9□□□□□ -0.97
SEC23YPR181C CFT1Q06632 1357 aaKnown RBP9□□□□□ -0.97
SEC23YPR181C PDR15Q04182 1529 aaKnown RBP8.98□□□□□ -0.97
SEC23YPR181C MLP2P40457 1679 aa8.98□□□□□ -0.97
SEC23YPR181C ATG2P53855 1592 aa8.97□□□□□ -0.97
SEC23YPR181C TFA1P36100 482 aa8.97□□□□□ -0.97
SEC23YPR181C KOG1P38873 1557 aa8.96□□□□□ -0.98
SEC23YPR181C RQC2Q12532 1038 aaKnown RBP8.96□□□□□ -0.98
SEC23YPR181C TOP2P06786 1428 aaKnown RBP8.94□□□□□ -0.98
SEC23YPR181C SRB8P25648 1427 aa8.93□□□□□ -0.98
SEC23YPR181C IME2P32581 645 aa8.93□□□□□ -0.98
SEC23YPR181C FUN12P39730 1002 aaKnown RBP8.92□□□□□ -0.98
SEC23YPR181C YFR016CP43597 1233 aaKnown RBP8.91□□□□□ -0.98
SEC23YPR181C PEP1P32319 1579 aa8.91□□□□□ -0.98
SEC23YPR181C RPO31P04051 1460 aa8.91□□□□□ -0.98
SEC23YPR181C ORC1P54784 914 aaPredicted RBP8.9□□□□□ -0.98
SEC23YPR181C CLC1P17891 233 aa8.89□□□□□ -0.99
SEC23YPR181C YLR419WQ06698 1435 aaKnown RBP8.89□□□□□ -0.99
SEC23YPR181C VPS15P22219 1454 aa8.88□□□□□ -0.99
SEC23YPR181C TY3B-GQ99315 1547 aa8.87□□□□□ -0.99
SEC23YPR181C RPC31P17890 251 aa8.87□□□□□ -0.99
SEC23YPR181C OPY1P38271 328 aa8.86□□□□□ -0.99
SEC23YPR181C ULS1Q08562 1619 aa8.86□□□□□ -0.99
SEC23YPR181C MHP1P43638 1398 aa8.82□□□□□ -1
SEC23YPR181C DNF1P32660 1571 aa8.82□□□□□ -1
SEC23YPR181C NUP159P40477 1460 aa8.8□□□□□ -1
SEC23YPR181C TY1B-DR3Q99231 1755 aa8.79□□□□□ -1
SEC23YPR181C EAF7P53911 425 aaKnown RBP8.77□□□□□ -1
SEC23YPR181C NOP7P53261 605 aaKnown RBP8.76□□□□□ -1.01
SEC23YPR181C TY2B-LR1P0C2J3 1770 aa8.75□□□□□ -1.01
SEC23YPR181C TY2B-FP0CX63 1770 aa8.75□□□□□ -1.01
SEC23YPR181C TY2B-GR2P0CX64 1770 aa8.75□□□□□ -1.01
SEC23YPR181C TY2B-CP25384 1770 aa8.75□□□□□ -1.01
SEC23YPR181C TY2B-DR2Q03494 1770 aa8.75□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms