RNA–Protein interactions for RNA: YPR175W

DPB2, Transcript of Second largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB2, Length 2,070 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB2YPR175W DRS1P32892 752 aaKnown RBP15.59■□□□□ 0.09
DPB2YPR175W MTC1P47018 478 aaKnown RBP14.66□□□□□ -0.06
DPB2YPR175W BFR2Q06631 534 aaKnown RBP13.85□□□□□ -0.19
DPB2YPR175W TFA1P36100 482 aa13.76□□□□□ -0.21
DPB2YPR175W AVT3P36062 692 aa13.18□□□□□ -0.3
DPB2YPR175W DIP2Q12220 943 aaPredicted RBP13□□□□□ -0.33
DPB2YPR175W RQC2Q12532 1038 aaKnown RBP12.23□□□□□ -0.45
DPB2YPR175W RSE1Q04693 1361 aaKnown RBP11.93□□□□□ -0.5
DPB2YPR175W DMA1P38823 416 aa11.69□□□□□ -0.54
DPB2YPR175W ISW2Q08773 1120 aa11.58□□□□□ -0.56
DPB2YPR175W RPG1P38249 964 aaKnown RBP11.51□□□□□ -0.57
DPB2YPR175W RPL17AP05740 184 aaKnown RBP11.47□□□□□ -0.57
DPB2YPR175W RPL17BP46990 184 aaKnown RBP11.47□□□□□ -0.57
DPB2YPR175W TAF7Q05021 590 aa11.4□□□□□ -0.58
DPB2YPR175W PTP3P40048 928 aa11.39□□□□□ -0.59
DPB2YPR175W PRI1P10363 409 aa11.28□□□□□ -0.6
DPB2YPR175W SPT21P35209 758 aa11.28□□□□□ -0.6
DPB2YPR175W RIM101P33400 625 aa11.26□□□□□ -0.61
DPB2YPR175W REB1P21538 810 aa11.15□□□□□ -0.63
DPB2YPR175W SSP1P38871 571 aa11.08□□□□□ -0.63
DPB2YPR175W LEO1P38439 464 aa11.04□□□□□ -0.64
DPB2YPR175W OXP1P28273 1286 aa11.02□□□□□ -0.65
DPB2YPR175W AAD16Q02895 342 aa10.86□□□□□ -0.67
DPB2YPR175W FAP1P53971 965 aa10.85□□□□□ -0.67
DPB2YPR175W YLR271WQ06152 274 aa10.84□□□□□ -0.67
DPB2YPR175W SAS10Q12136 610 aaPredicted RBP10.82□□□□□ -0.68
DPB2YPR175W YAH1Q12184 172 aaKnown RBP10.82□□□□□ -0.68
DPB2YPR175W TSR3Q12094 313 aaKnown RBP10.76□□□□□ -0.69
DPB2YPR175W LEU3P08638 886 aa10.72□□□□□ -0.69
DPB2YPR175W YKR023WP36119 530 aaKnown RBP10.71□□□□□ -0.69
DPB2YPR175W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.67□□□□□ -0.7not detected
DPB2YPR175W MGA2P40578 1113 aa10.59□□□□□ -0.71
DPB2YPR175W YIL055CP40523 627 aaKnown RBP10.59□□□□□ -0.71
DPB2YPR175W CST9Q06032 482 aa10.59□□□□□ -0.71
DPB2YPR175W RSM7P47150 247 aa10.52□□□□□ -0.73
DPB2YPR175W PSD2P53037 1138 aaKnown RBP10.45□□□□□ -0.74
DPB2YPR175W HOP09932 586 aa10.43□□□□□ -0.74
DPB2YPR175W TFC8Q12308 588 aa10.43□□□□□ -0.74
DPB2YPR175W DCD1P06773 312 aa10.4□□□□□ -0.74
DPB2YPR175W DMA2P53924 522 aa10.35□□□□□ -0.75
DPB2YPR175W ABP1P15891 592 aaKnown RBP10.34□□□□□ -0.75
DPB2YPR175W AI2P03876 854 aa10.3□□□□□ -0.76
DPB2YPR175W RAM2P29703 316 aa10.3□□□□□ -0.76
DPB2YPR175W RPN1P38764 993 aaKnown RBP10.27□□□□□ -0.77
DPB2YPR175W CDC27P38042 758 aa10.26□□□□□ -0.77
DPB2YPR175W BCH2P36122 765 aa10.19□□□□□ -0.78
DPB2YPR175W RCR1P38212 213 aa10.19□□□□□ -0.78
DPB2YPR175W YPR148CQ06523 435 aa10.19□□□□□ -0.78
DPB2YPR175W SET1P38827 1080 aaKnown RBP10.18□□□□□ -0.78
DPB2YPR175W MRPL32P25348 183 aa10.16□□□□□ -0.78
DPB2YPR175W PRY3P47033 881 aa10.16□□□□□ -0.78
DPB2YPR175W VPS70P47161 811 aa10.11□□□□□ -0.79
DPB2YPR175W SPB4P25808 606 aaPredicted RBP10.08□□□□□ -0.8
DPB2YPR175W CKB1P43639 278 aa10.05□□□□□ -0.8
DPB2YPR175W MRM1P25270 412 aa10.05□□□□□ -0.8
DPB2YPR175W BBC1P47068 1157 aa10.03□□□□□ -0.8
DPB2YPR175W EPS1P40557 701 aa10.03□□□□□ -0.8
DPB2YPR175W YCK3P39962 524 aa10.01□□□□□ -0.81
DPB2YPR175W DSF2P38213 736 aa10□□□□□ -0.81
DPB2YPR175W BDF1P35817 686 aa9.97□□□□□ -0.81
DPB2YPR175W RLF2Q12495 606 aa9.97□□□□□ -0.81
DPB2YPR175W MAK11P20484 414 aaKnown RBP9.94□□□□□ -0.82
DPB2YPR175W IFH1P39520 1085 aa9.92□□□□□ -0.82
DPB2YPR175W RTG3P38165 486 aa9.91□□□□□ -0.82
DPB2YPR175W PBS2P08018 668 aa9.9□□□□□ -0.82
DPB2YPR175W KIN1P13185 1064 aa9.87□□□□□ -0.83
DPB2YPR175W VPS29P38759 282 aa9.86□□□□□ -0.83
DPB2YPR175W YNR021WP53723 404 aaKnown RBP9.84□□□□□ -0.83
DPB2YPR175W COQ8P27697 501 aa9.83□□□□□ -0.84
DPB2YPR175W GLC3P32775 704 aa9.8□□□□□ -0.84
DPB2YPR175W NUP42P49686 430 aaKnown RBP9.79□□□□□ -0.84
DPB2YPR175W DIT2P21595 489 aa9.78□□□□□ -0.84
DPB2YPR175W SCY1P53009 804 aa9.75□□□□□ -0.85
DPB2YPR175W EDS1P38073 919 aa9.75□□□□□ -0.85
DPB2YPR175W AIM7Q12156 149 aa9.74□□□□□ -0.85
DPB2YPR175W GUA1P38625 525 aaKnown RBP9.73□□□□□ -0.85
DPB2YPR175W IES2P40154 320 aa9.73□□□□□ -0.85
DPB2YPR175W MAM3Q12296 706 aa9.72□□□□□ -0.85
DPB2YPR175W STS1P38637 319 aa9.71□□□□□ -0.86
DPB2YPR175W REF2P42073 533 aaPredicted RBP9.68□□□□□ -0.86
DPB2YPR175W NOP53Q12080 455 aaKnown RBP9.67□□□□□ -0.86
DPB2YPR175W MAP2P38174 421 aaKnown RBP9.65□□□□□ -0.87
DPB2YPR175W MIF2P35201 549 aa9.62□□□□□ -0.87
DPB2YPR175W COX6P00427 148 aa9.6□□□□□ -0.87
DPB2YPR175W YMR1P47147 688 aaKnown RBP RIP-Chip data9.59□□□□□ -0.87not detected
DPB2YPR175W YFR006WP43590 535 aa9.58□□□□□ -0.88
DPB2YPR175W HAA1Q12753 694 aaKnown RBP9.57□□□□□ -0.88
DPB2YPR175W DBP1P24784 617 aaKnown RBP9.55□□□□□ -0.88
DPB2YPR175W YDR090CQ03193 310 aa9.54□□□□□ -0.88
DPB2YPR175W PTC3P34221 468 aaKnown RBP9.54□□□□□ -0.88
DPB2YPR175W HPC2Q01448 625 aa9.53□□□□□ -0.88
DPB2YPR175W MAK21Q12176 1025 aaKnown RBP9.53□□□□□ -0.88
DPB2YPR175W UBP10P53874 792 aaPredicted RBP9.52□□□□□ -0.88
DPB2YPR175W TFB3Q03290 321 aa9.52□□□□□ -0.88
DPB2YPR175W PKC1P24583 1151 aa9.49□□□□□ -0.89
DPB2YPR175W UBP14P38237 781 aaKnown RBP9.49□□□□□ -0.89
DPB2YPR175W ATF2P53296 535 aa9.47□□□□□ -0.89
DPB2YPR175W HGH1P48362 394 aaKnown RBP9.45□□□□□ -0.9
DPB2YPR175W SLX5P32828 619 aaKnown RBP9.43□□□□□ -0.9
DPB2YPR175W VHR2P40041 505 aa9.43□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms