Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 HOC1YJR075W 1191 nt5.43□□□□□ -1.54
VPS55P47111 CYS4YGR155W 1524 nt5.43□□□□□ -1.54
VPS55P47111 FCY2YER056C 1602 nt5.42□□□□□ -1.54
VPS55P47111 CLN1YMR199W 1641 nt5.42□□□□□ -1.54
VPS55P47111 AGX1YFL030W 1158 nt5.42□□□□□ -1.54
VPS55P47111 LIA1YJR070C 978 nt5.42□□□□□ -1.54
VPS55P47111 PAC10YGR078C 600 nt5.41□□□□□ -1.54
VPS55P47111 ASR1YPR093C 867 nt5.41□□□□□ -1.54
VPS55P47111 FCY22YER060W-A 1593 nt5.41□□□□□ -1.54
VPS55P47111 HPT1YDR399W 666 nt5.4□□□□□ -1.54
VPS55P47111 RRN10YBL025W 438 nt5.4□□□□□ -1.54
VPS55P47111 EXG2YDR261C 1689 nt5.4□□□□□ -1.55
VPS55P47111 GPD1YDL022W 1176 nt5.39□□□□□ -1.55
VPS55P47111 LOT6YLR011W 576 nt5.39□□□□□ -1.55
VPS55P47111 YOR012WYOR012W 414 nt5.39□□□□□ -1.55
VPS55P47111 DLD1YDL174C 1764 nt5.39□□□□□ -1.55
VPS55P47111 CTA1YDR256C 1548 nt5.38□□□□□ -1.55
VPS55P47111 PRP2YNR011C 2631 nt5.38□□□□□ -1.55
VPS55P47111 VBA5YKR105C 1749 nt5.38□□□□□ -1.55
VPS55P47111 MIX17YMR002W 471 nt5.38□□□□□ -1.55
VPS55P47111 MRPL19YNL185C 477 nt5.38□□□□□ -1.55
VPS55P47111 SMK1YPR054W 1167 nt5.38□□□□□ -1.55
VPS55P47111 NUP49YGL172W 1419 nt5.38□□□□□ -1.55
VPS55P47111 MSG5YNL053W 1470 nt5.38□□□□□ -1.55
VPS55P47111 SGE1YPR198W 1632 nt5.37□□□□□ -1.55
VPS55P47111 ADE17YMR120C 1779 nt5.37□□□□□ -1.55
VPS55P47111 YGL102CYGL102C 429 nt5.37□□□□□ -1.55
VPS55P47111 YIP4YGL198W 708 nt5.37□□□□□ -1.55
VPS55P47111 PTC7YHR076W 1032 nt5.37□□□□□ -1.55
VPS55P47111 YLL056CYLL056C 897 nt5.37□□□□□ -1.55
VPS55P47111 TDP1YBR223C 1635 nt5.37□□□□□ -1.55
VPS55P47111 YCR041WYCR041W 333 nt5.36□□□□□ -1.55
VPS55P47111 VMA2YBR127C 1554 nt5.36□□□□□ -1.55
VPS55P47111 YLL058WYLL058W 1728 nt5.36□□□□□ -1.55
VPS55P47111 FMP40YPL222W 2067 nt5.36□□□□□ -1.55
VPS55P47111 PRI1YIR008C 1230 nt5.35□□□□□ -1.55
VPS55P47111 REC107YJR021C 945 nt5.35□□□□□ -1.55
VPS55P47111 SPG5YMR191W 1122 nt5.35□□□□□ -1.55
VPS55P47111 IRC5YFR038W 2562 nt5.35□□□□□ -1.55
VPS55P47111 NUP84YDL116W 2181 nt5.35□□□□□ -1.55
VPS55P47111 ICP55YER078C 1536 nt5.34□□□□□ -1.55
VPS55P47111 NMD5YJR132W 3147 nt5.34□□□□□ -1.55
VPS55P47111 MRPL35YDR322W 1104 nt5.34□□□□□ -1.55
VPS55P47111 HMS2YJR147W 1077 nt5.34□□□□□ -1.55
VPS55P47111 SMX3YPR182W 261 nt5.34□□□□□ -1.55
VPS55P47111 MRPS28YDR337W 861 nt5.33□□□□□ -1.56
VPS55P47111 SNF4YGL115W 969 nt5.33□□□□□ -1.56
VPS55P47111 ASF1YJL115W 840 nt5.33□□□□□ -1.56
VPS55P47111 YLR112WYLR112W 420 nt5.33□□□□□ -1.56
VPS55P47111 MSC3YLR219W 2187 nt5.32□□□□□ -1.56
VPS55P47111 AIM2YAL049C 741 nt5.32□□□□□ -1.56
VPS55P47111 CRH1YGR189C 1524 nt5.32□□□□□ -1.56
VPS55P47111 GLN3YER040W 2193 nt5.32□□□□□ -1.56
VPS55P47111 YMR034CYMR034C 1305 nt5.31□□□□□ -1.56
VPS55P47111 LCL3YGL085W 825 nt5.31□□□□□ -1.56
VPS55P47111 FMO1YHR176W 1299 nt5.31□□□□□ -1.56
VPS55P47111 TPK1YJL164C 1194 nt5.31□□□□□ -1.56
VPS55P47111 SWD1YAR003W 1281 nt5.31□□□□□ -1.56
VPS55P47111 FPR2YDR519W 408 nt5.3□□□□□ -1.56
VPS55P47111 RPL2BYIL018W 765 nt5.3□□□□□ -1.56
VPS55P47111 YKL018C-AYKL018C-A 300 nt5.3□□□□□ -1.56
VPS55P47111 SRY1YKL218C 981 nt5.3□□□□□ -1.56
VPS55P47111 TAF9YMR236W 474 nt5.3□□□□□ -1.56
VPS55P47111 SNT309YPR101W 528 nt5.3□□□□□ -1.56
VPS55P47111 YDR510C-AYDR510C-A 117 nt5.29□□□□□ -1.56
VPS55P47111 YIL029W-AYIL029W-A 372 nt5.29□□□□□ -1.56
VPS55P47111 AIM20YIL158W 615 nt5.29□□□□□ -1.56
VPS55P47111 RPL31BYLR406C 342 nt5.29□□□□□ -1.56
VPS55P47111 MRPS18YNL306W 654 nt5.29□□□□□ -1.56
VPS55P47111 TMA46YOR091W 1038 nt5.29□□□□□ -1.56
VPS55P47111 YBR113WYBR113W 483 nt5.29□□□□□ -1.56
VPS55P47111 AMN1YBR158W 1650 nt5.28□□□□□ -1.56
VPS55P47111 RNH1YMR234W 1047 nt5.28□□□□□ -1.56
VPS55P47111 LSC1YOR142W 990 nt5.28□□□□□ -1.56
VPS55P47111 SAL1YNL083W 1485 nt5.27□□□□□ -1.57
VPS55P47111 YBR284WYBR284W 2394 nt5.27□□□□□ -1.57
VPS55P47111 TUF1YOR187W 1314 nt5.26□□□□□ -1.57
VPS55P47111 IMG1YCR046C 510 nt5.26□□□□□ -1.57
VPS55P47111 PMP3YDR276C 168 nt5.26□□□□□ -1.57
VPS55P47111 GTT3YEL017W 1014 nt5.26□□□□□ -1.57
VPS55P47111 MTR3YGR158C 753 nt5.26□□□□□ -1.57
VPS55P47111 TKL2YBR117C 2046 nt5.26□□□□□ -1.57
VPS55P47111 AVT4YNL101W 2142 nt5.26□□□□□ -1.57
VPS55P47111 NOG2YNR053C 1461 nt5.26□□□□□ -1.57
VPS55P47111 GPH1YPR160W 2709 nt5.25□□□□□ -1.57
VPS55P47111 CEM1YER061C 1329 nt5.25□□□□□ -1.57
VPS55P47111 YDL177CYDL177C 513 nt5.25□□□□□ -1.57
VPS55P47111 HED1YDR014W-A 489 nt5.25□□□□□ -1.57
VPS55P47111 TRS31YDR472W 852 nt5.25□□□□□ -1.57
VPS55P47111 GCG1YER163C 699 nt5.25□□□□□ -1.57
VPS55P47111 YSC83YHR017W 1158 nt5.25□□□□□ -1.57
VPS55P47111 NTG1YAL015C 1200 nt5.25□□□□□ -1.57
VPS55P47111 SEC62YPL094C 825 nt5.25□□□□□ -1.57
VPS55P47111 MCH2YKL221W 1422 nt5.24□□□□□ -1.57
VPS55P47111 OPI7YDR360W 435 nt5.24□□□□□ -1.57
VPS55P47111 MRPL28YDR462W 444 nt5.24□□□□□ -1.57
VPS55P47111 YKL077WYKL077W 1179 nt5.24□□□□□ -1.57
VPS55P47111 ILV6YCL009C 930 nt5.24□□□□□ -1.57
VPS55P47111 NTE1YML059C 5040 nt5.24□□□□□ -1.57
VPS55P47111 PAC2YER007W 1557 nt5.24□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 47.7 ms