Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.92■■□□□ 1.74
PCK1P35558 MIR3648-2-201ENST00000581792 180 ntBASIC25.92■■□□□ 1.74
PCK1P35558 MIR3648-1-201ENST00000615959 180 ntBASIC25.92■■□□□ 1.74
PCK1P35558 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCK1P35558 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
PCK1P35558 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.91■■□□□ 1.74
PCK1P35558 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCK1P35558 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCK1P35558 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCK1P35558 MIR219A2-201ENST00000608502 1504 ntBASIC25.9■■□□□ 1.74
PCK1P35558 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
PCK1P35558 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCK1P35558 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCK1P35558 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCK1P35558 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
PCK1P35558 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.89■■□□□ 1.74
PCK1P35558 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.89■■□□□ 1.74
PCK1P35558 HLA-V-202ENST00000446817 847 ntBASIC25.89■■□□□ 1.74
PCK1P35558 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.89■■□□□ 1.74
PCK1P35558 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.89■■□□□ 1.74
PCK1P35558 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.89■■□□□ 1.73
PCK1P35558 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCK1P35558 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.89■■□□□ 1.73
PCK1P35558 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCK1P35558 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCK1P35558 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCK1P35558 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCK1P35558 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCK1P35558 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.87■■□□□ 1.73
PCK1P35558 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
PCK1P35558 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
PCK1P35558 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PCK1P35558 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
PCK1P35558 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCK1P35558 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCK1P35558 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCK1P35558 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PCK1P35558 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCK1P35558 AP004609.3-201ENST00000610705 1884 ntBASIC25.84■■□□□ 1.73
PCK1P35558 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCK1P35558 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
PCK1P35558 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCK1P35558 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCK1P35558 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.83■■□□□ 1.73
PCK1P35558 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCK1P35558 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCK1P35558 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
PCK1P35558 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
PCK1P35558 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
PCK1P35558 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCK1P35558 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.82■■□□□ 1.72
PCK1P35558 AC016575.1-201ENST00000607026 382 ntBASIC25.82■■□□□ 1.72
PCK1P35558 MIR7108-201ENST00000614319 87 ntBASIC25.82■■□□□ 1.72
PCK1P35558 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCK1P35558 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCK1P35558 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
PCK1P35558 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCK1P35558 AC142472.1-201ENST00000612013 1741 ntBASIC25.81■■□□□ 1.72
PCK1P35558 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCK1P35558 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.81■■□□□ 1.72
PCK1P35558 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.81■■□□□ 1.72
PCK1P35558 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
PCK1P35558 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCK1P35558 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.8■■□□□ 1.72
PCK1P35558 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.79■■□□□ 1.72
PCK1P35558 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCK1P35558 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.79■■□□□ 1.72
PCK1P35558 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.79■■□□□ 1.72
PCK1P35558 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCK1P35558 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCK1P35558 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCK1P35558 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCK1P35558 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCK1P35558 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCK1P35558 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCK1P35558 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCK1P35558 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCK1P35558 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
PCK1P35558 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.76■■□□□ 1.71
PCK1P35558 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.76■■□□□ 1.71
PCK1P35558 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.76■■□□□ 1.71
PCK1P35558 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.76■■□□□ 1.71
PCK1P35558 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.75■■□□□ 1.71
PCK1P35558 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCK1P35558 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCK1P35558 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCK1P35558 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.75■■□□□ 1.71
PCK1P35558 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.74■■□□□ 1.71
PCK1P35558 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
PCK1P35558 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCK1P35558 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.74■■□□□ 1.71
PCK1P35558 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCK1P35558 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
PCK1P35558 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.72■■□□□ 1.71
PCK1P35558 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCK1P35558 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCK1P35558 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.72■■□□□ 1.71
PCK1P35558 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCK1P35558 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCK1P35558 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms