Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC020928.2-201ENST00000588717 2197 ntBASIC26.95■■□□□ 1.91
KRT9P35527 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
KRT9P35527 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KRT9P35527 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KRT9P35527 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
KRT9P35527 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
KRT9P35527 LINC01971-201ENST00000617888 1048 ntBASIC26.93■■□□□ 1.9
KRT9P35527 AC110285.7-201ENST00000624417 1536 ntBASIC26.93■■□□□ 1.9
KRT9P35527 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
KRT9P35527 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
KRT9P35527 AC092803.2-201ENST00000564287 1899 ntBASIC26.93■■□□□ 1.9
KRT9P35527 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
KRT9P35527 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
KRT9P35527 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.91■■□□□ 1.9
KRT9P35527 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.91■■□□□ 1.9
KRT9P35527 DUSP8P4-201ENST00000399538 1761 ntBASIC26.91■■□□□ 1.9
KRT9P35527 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
KRT9P35527 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
KRT9P35527 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
KRT9P35527 ZNRF2P2-203ENST00000454624 420 ntBASIC26.9■■□□□ 1.9
KRT9P35527 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.9■■□□□ 1.9
KRT9P35527 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.9■■□□□ 1.9
KRT9P35527 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
KRT9P35527 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.89■■□□□ 1.9
KRT9P35527 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.89■■□□□ 1.9
KRT9P35527 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
KRT9P35527 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.88■■□□□ 1.89
KRT9P35527 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.88■■□□□ 1.89
KRT9P35527 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.88■■□□□ 1.89
KRT9P35527 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.88■■□□□ 1.89
KRT9P35527 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.88■■□□□ 1.89
KRT9P35527 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
KRT9P35527 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KRT9P35527 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KRT9P35527 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
KRT9P35527 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KRT9P35527 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.87■■□□□ 1.89
KRT9P35527 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.87■■□□□ 1.89
KRT9P35527 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.87■■□□□ 1.89
KRT9P35527 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KRT9P35527 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
KRT9P35527 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KRT9P35527 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.85■■□□□ 1.89
KRT9P35527 ABHD17AP4-201ENST00000411545 909 ntBASIC26.85■■□□□ 1.89
KRT9P35527 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.85■■□□□ 1.89
KRT9P35527 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
KRT9P35527 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.84■■□□□ 1.89
KRT9P35527 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
KRT9P35527 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
KRT9P35527 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
KRT9P35527 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
KRT9P35527 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
KRT9P35527 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.88
KRT9P35527 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
KRT9P35527 AC142472.1-201ENST00000612013 1741 ntBASIC26.82■■□□□ 1.88
KRT9P35527 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
KRT9P35527 DUX4L11-201ENST00000611504 1267 ntBASIC26.81■■□□□ 1.88
KRT9P35527 DUX4L12-201ENST00000614593 1267 ntBASIC26.81■■□□□ 1.88
KRT9P35527 DUX4L14-201ENST00000621227 1267 ntBASIC26.81■■□□□ 1.88
KRT9P35527 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
KRT9P35527 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.81■■□□□ 1.88
KRT9P35527 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.8■■□□□ 1.88
KRT9P35527 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
KRT9P35527 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
KRT9P35527 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.8■■□□□ 1.88
KRT9P35527 DUX4L13-201ENST00000554103 1267 ntBASIC26.8■■□□□ 1.88
KRT9P35527 DUX4L15-201ENST00000611059 1267 ntBASIC26.8■■□□□ 1.88
KRT9P35527 DUX4L23-201ENST00000615195 1269 ntBASIC26.8■■□□□ 1.88
KRT9P35527 DUX4L24-201ENST00000617576 1269 ntBASIC26.8■■□□□ 1.88
KRT9P35527 DUX4L22-201ENST00000618238 1269 ntBASIC26.8■■□□□ 1.88
KRT9P35527 DUX4L20-201ENST00000619712 1269 ntBASIC26.8■■□□□ 1.88
KRT9P35527 DUX4L21-201ENST00000622058 1269 ntBASIC26.8■■□□□ 1.88
KRT9P35527 DUX4L10-201ENST00000622460 1267 ntBASIC26.8■■□□□ 1.88
KRT9P35527 DUX4L25-201ENST00000624915 1269 ntBASIC26.8■■□□□ 1.88
KRT9P35527 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
KRT9P35527 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.8■■□□□ 1.88
KRT9P35527 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
KRT9P35527 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
KRT9P35527 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
KRT9P35527 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
KRT9P35527 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
KRT9P35527 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
KRT9P35527 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
KRT9P35527 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
KRT9P35527 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
KRT9P35527 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
KRT9P35527 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
KRT9P35527 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
KRT9P35527 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
KRT9P35527 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.78■■□□□ 1.88
KRT9P35527 WHAMMP3-201ENST00000611636 1609 ntBASIC26.78■■□□□ 1.88
KRT9P35527 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
KRT9P35527 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
KRT9P35527 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
KRT9P35527 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
KRT9P35527 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
KRT9P35527 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
KRT9P35527 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
KRT9P35527 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
KRT9P35527 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms