Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.03■■□□□ 1.28
GABRA3P34903 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.03■■□□□ 1.28
GABRA3P34903 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
GABRA3P34903 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
GABRA3P34903 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
GABRA3P34903 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
GABRA3P34903 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
GABRA3P34903 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
GABRA3P34903 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GABRA3P34903 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
GABRA3P34903 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.01■■□□□ 1.27
GABRA3P34903 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.01■■□□□ 1.27
GABRA3P34903 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
GABRA3P34903 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
GABRA3P34903 MIR639-201ENST00000384974 98 ntBASIC23■■□□□ 1.27
GABRA3P34903 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23■■□□□ 1.27
GABRA3P34903 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
GABRA3P34903 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
GABRA3P34903 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23■■□□□ 1.27
GABRA3P34903 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
GABRA3P34903 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
GABRA3P34903 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
GABRA3P34903 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.99■■□□□ 1.27
GABRA3P34903 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
GABRA3P34903 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
GABRA3P34903 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
GABRA3P34903 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
GABRA3P34903 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.98■■□□□ 1.27
GABRA3P34903 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.97■■□□□ 1.27
GABRA3P34903 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.97■■□□□ 1.27
GABRA3P34903 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.97■■□□□ 1.27
GABRA3P34903 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
GABRA3P34903 AP004609.3-201ENST00000610705 1884 ntBASIC22.96■■□□□ 1.27
GABRA3P34903 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
GABRA3P34903 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
GABRA3P34903 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
GABRA3P34903 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
GABRA3P34903 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.95■■□□□ 1.26
GABRA3P34903 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
GABRA3P34903 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.95■■□□□ 1.26
GABRA3P34903 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.95■■□□□ 1.26
GABRA3P34903 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
GABRA3P34903 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
GABRA3P34903 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
GABRA3P34903 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.93■■□□□ 1.26
GABRA3P34903 AL359258.2-201ENST00000564063 1566 ntBASIC22.93■■□□□ 1.26
GABRA3P34903 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
GABRA3P34903 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
GABRA3P34903 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
GABRA3P34903 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
GABRA3P34903 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
GABRA3P34903 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
GABRA3P34903 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
GABRA3P34903 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GABRA3P34903 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
GABRA3P34903 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
GABRA3P34903 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.92■■□□□ 1.26
GABRA3P34903 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
GABRA3P34903 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
GABRA3P34903 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
GABRA3P34903 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.91■■□□□ 1.26
GABRA3P34903 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
GABRA3P34903 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
GABRA3P34903 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.9■■□□□ 1.26
GABRA3P34903 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.9■■□□□ 1.26
GABRA3P34903 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
GABRA3P34903 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.9■■□□□ 1.26
GABRA3P34903 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.9■■□□□ 1.26
GABRA3P34903 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
GABRA3P34903 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
GABRA3P34903 AC142472.1-201ENST00000612013 1741 ntBASIC22.89■■□□□ 1.26
GABRA3P34903 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
GABRA3P34903 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
GABRA3P34903 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
GABRA3P34903 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.89■■□□□ 1.25
GABRA3P34903 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
GABRA3P34903 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
GABRA3P34903 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
GABRA3P34903 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
GABRA3P34903 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
GABRA3P34903 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
GABRA3P34903 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
GABRA3P34903 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
GABRA3P34903 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
GABRA3P34903 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.88■■□□□ 1.25
GABRA3P34903 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
GABRA3P34903 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
GABRA3P34903 AC126177.7-201ENST00000547904 679 ntBASIC22.87■■□□□ 1.25
GABRA3P34903 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
GABRA3P34903 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
GABRA3P34903 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.86■■□□□ 1.25
GABRA3P34903 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
GABRA3P34903 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.86■■□□□ 1.25
GABRA3P34903 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
GABRA3P34903 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.86■■□□□ 1.25
GABRA3P34903 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
GABRA3P34903 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
GABRA3P34903 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.85■■□□□ 1.25
GABRA3P34903 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.85■■□□□ 1.25
GABRA3P34903 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms