Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.17■■■□□ 2.58
CHRNA5P30532 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.17■■■□□ 2.58
CHRNA5P30532 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHRNA5P30532 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.16■■■□□ 2.58
CHRNA5P30532 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.16■■■□□ 2.58
CHRNA5P30532 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.16■■■□□ 2.58
CHRNA5P30532 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.16■■■□□ 2.58
CHRNA5P30532 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHRNA5P30532 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHRNA5P30532 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHRNA5P30532 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.15■■■□□ 2.58
CHRNA5P30532 AL356441.2-201ENST00000443009 864 ntBASIC31.15■■■□□ 2.58
CHRNA5P30532 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CHRNA5P30532 MIR4508-201ENST00000584178 70 ntBASIC31.15■■■□□ 2.58
CHRNA5P30532 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.15■■■□□ 2.58
CHRNA5P30532 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.14■■■□□ 2.58
CHRNA5P30532 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.14■■■□□ 2.58
CHRNA5P30532 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.14■■■□□ 2.58
CHRNA5P30532 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHRNA5P30532 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHRNA5P30532 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.12■■■□□ 2.57
CHRNA5P30532 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.12■■■□□ 2.57
CHRNA5P30532 AC103724.3-201ENST00000564481 992 ntBASIC31.12■■■□□ 2.57
CHRNA5P30532 AC018755.3-202ENST00000596210 929 ntBASIC31.12■■■□□ 2.57
CHRNA5P30532 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
CHRNA5P30532 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHRNA5P30532 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHRNA5P30532 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHRNA5P30532 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHRNA5P30532 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHRNA5P30532 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHRNA5P30532 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.11■■■□□ 2.57
CHRNA5P30532 MIR935-201ENST00000401179 91 ntBASIC31.1■■■□□ 2.57
CHRNA5P30532 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.1■■■□□ 2.57
CHRNA5P30532 MIR3960-201ENST00000583311 91 ntBASIC31.1■■■□□ 2.57
CHRNA5P30532 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHRNA5P30532 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHRNA5P30532 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.09■■■□□ 2.57
CHRNA5P30532 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.08■■■□□ 2.57
CHRNA5P30532 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHRNA5P30532 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHRNA5P30532 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
CHRNA5P30532 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.07■■■□□ 2.56
CHRNA5P30532 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHRNA5P30532 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.07■■■□□ 2.56
CHRNA5P30532 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHRNA5P30532 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.06■■■□□ 2.56
CHRNA5P30532 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHRNA5P30532 AL031848.2-201ENST00000607670 837 ntBASIC31.06■■■□□ 2.56
CHRNA5P30532 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
CHRNA5P30532 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHRNA5P30532 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
CHRNA5P30532 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHRNA5P30532 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CHRNA5P30532 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
CHRNA5P30532 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.04■■■□□ 2.56
CHRNA5P30532 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.04■■■□□ 2.56
CHRNA5P30532 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
CHRNA5P30532 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CHRNA5P30532 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.03■■■□□ 2.56
CHRNA5P30532 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHRNA5P30532 AP004833.2-201ENST00000532228 1454 ntBASIC31.02■■■□□ 2.56
CHRNA5P30532 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CHRNA5P30532 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.02■■■□□ 2.56
CHRNA5P30532 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.02■■■□□ 2.56
CHRNA5P30532 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CHRNA5P30532 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.01■■■□□ 2.56
CHRNA5P30532 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHRNA5P30532 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.01■■■□□ 2.55
CHRNA5P30532 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHRNA5P30532 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHRNA5P30532 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31■■■□□ 2.55
CHRNA5P30532 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHRNA5P30532 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31■■■□□ 2.55
CHRNA5P30532 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31■■■□□ 2.55
CHRNA5P30532 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CHRNA5P30532 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHRNA5P30532 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.99■■■□□ 2.55
CHRNA5P30532 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.98■■■□□ 2.55
CHRNA5P30532 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.98■■■□□ 2.55
CHRNA5P30532 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
CHRNA5P30532 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CHRNA5P30532 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.97■■■□□ 2.55
CHRNA5P30532 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
CHRNA5P30532 AC239859.2-201ENST00000444165 318 ntBASIC30.96■■■□□ 2.55
CHRNA5P30532 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.96■■■□□ 2.55
CHRNA5P30532 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.96■■■□□ 2.55
CHRNA5P30532 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CHRNA5P30532 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.94■■■□□ 2.54
CHRNA5P30532 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHRNA5P30532 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
CHRNA5P30532 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHRNA5P30532 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHRNA5P30532 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHRNA5P30532 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHRNA5P30532 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.91■■■□□ 2.54
CHRNA5P30532 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.9■■■□□ 2.54
CHRNA5P30532 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CHRNA5P30532 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CHRNA5P30532 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.9■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms