Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
KCNA3P22001 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.16■■■□□ 2.58
KCNA3P22001 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
KCNA3P22001 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
KCNA3P22001 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
KCNA3P22001 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
KCNA3P22001 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.14■■■□□ 2.58
KCNA3P22001 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.14■■■□□ 2.58
KCNA3P22001 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
KCNA3P22001 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.13■■■□□ 2.57
KCNA3P22001 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
KCNA3P22001 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
KCNA3P22001 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
KCNA3P22001 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.13■■■□□ 2.57
KCNA3P22001 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
KCNA3P22001 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
KCNA3P22001 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.12■■■□□ 2.57
KCNA3P22001 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
KCNA3P22001 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
KCNA3P22001 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
KCNA3P22001 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.11■■■□□ 2.57
KCNA3P22001 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
KCNA3P22001 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
KCNA3P22001 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
KCNA3P22001 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
KCNA3P22001 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.09■■■□□ 2.57
KCNA3P22001 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
KCNA3P22001 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.09■■■□□ 2.57
KCNA3P22001 AC018755.3-202ENST00000596210 929 ntBASIC31.09■■■□□ 2.57
KCNA3P22001 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
KCNA3P22001 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
KCNA3P22001 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.08■■■□□ 2.57
KCNA3P22001 AL031848.2-201ENST00000607670 837 ntBASIC31.08■■■□□ 2.57
KCNA3P22001 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
KCNA3P22001 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
KCNA3P22001 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
KCNA3P22001 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.07■■■□□ 2.56
KCNA3P22001 MIR3960-201ENST00000583311 91 ntBASIC31.07■■■□□ 2.56
KCNA3P22001 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
KCNA3P22001 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.06■■■□□ 2.56
KCNA3P22001 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.06■■■□□ 2.56
KCNA3P22001 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.06■■■□□ 2.56
KCNA3P22001 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
KCNA3P22001 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.05■■■□□ 2.56
KCNA3P22001 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
KCNA3P22001 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
KCNA3P22001 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
KCNA3P22001 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
KCNA3P22001 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
KCNA3P22001 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.04■■■□□ 2.56
KCNA3P22001 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
KCNA3P22001 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
KCNA3P22001 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
KCNA3P22001 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.03■■■□□ 2.56
KCNA3P22001 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.02■■■□□ 2.56
KCNA3P22001 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
KCNA3P22001 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
KCNA3P22001 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.56
KCNA3P22001 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
KCNA3P22001 AC100797.4-201ENST00000631653 1827 ntBASIC31.01■■■□□ 2.55
KCNA3P22001 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
KCNA3P22001 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.99■■■□□ 2.55
KCNA3P22001 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.99■■■□□ 2.55
KCNA3P22001 AC239859.2-201ENST00000444165 318 ntBASIC30.99■■■□□ 2.55
KCNA3P22001 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.98■■■□□ 2.55
KCNA3P22001 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
KCNA3P22001 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
KCNA3P22001 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
KCNA3P22001 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.97■■■□□ 2.55
KCNA3P22001 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
KCNA3P22001 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
KCNA3P22001 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
KCNA3P22001 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
KCNA3P22001 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.96■■■□□ 2.55
KCNA3P22001 AP004833.2-201ENST00000532228 1454 ntBASIC30.95■■■□□ 2.55
KCNA3P22001 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.95■■■□□ 2.55
KCNA3P22001 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
KCNA3P22001 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
KCNA3P22001 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.95■■■□□ 2.55
KCNA3P22001 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
KCNA3P22001 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
KCNA3P22001 AC008406.3-201ENST00000620001 1374 ntBASIC30.93■■■□□ 2.54
KCNA3P22001 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.92■■■□□ 2.54
KCNA3P22001 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
KCNA3P22001 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.91■■■□□ 2.54
KCNA3P22001 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.9■■■□□ 2.54
KCNA3P22001 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.9■■■□□ 2.54
KCNA3P22001 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
KCNA3P22001 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.54
KCNA3P22001 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.89■■■□□ 2.54
KCNA3P22001 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.89■■■□□ 2.54
KCNA3P22001 AC019171.1-201ENST00000601251 1056 ntBASIC30.89■■■□□ 2.54
KCNA3P22001 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.89■■■□□ 2.54
KCNA3P22001 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.88■■■□□ 2.53
KCNA3P22001 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.88■■■□□ 2.53
KCNA3P22001 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
KCNA3P22001 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
KCNA3P22001 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
KCNA3P22001 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.87■■■□□ 2.53
KCNA3P22001 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms