Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.58■■□□□ 1.37
BCKDHAP12694 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
BCKDHAP12694 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.57■■□□□ 1.36
BCKDHAP12694 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
BCKDHAP12694 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
BCKDHAP12694 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
BCKDHAP12694 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
BCKDHAP12694 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
BCKDHAP12694 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BCKDHAP12694 DUSP8P4-201ENST00000399538 1761 ntBASIC23.56■■□□□ 1.36
BCKDHAP12694 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
BCKDHAP12694 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BCKDHAP12694 DUX4L13-201ENST00000554103 1267 ntBASIC23.55■■□□□ 1.36
BCKDHAP12694 DUX4L15-201ENST00000611059 1267 ntBASIC23.55■■□□□ 1.36
BCKDHAP12694 DUX4L23-201ENST00000615195 1269 ntBASIC23.55■■□□□ 1.36
BCKDHAP12694 DUX4L24-201ENST00000617576 1269 ntBASIC23.55■■□□□ 1.36
BCKDHAP12694 DUX4L22-201ENST00000618238 1269 ntBASIC23.55■■□□□ 1.36
BCKDHAP12694 DUX4L20-201ENST00000619712 1269 ntBASIC23.55■■□□□ 1.36
BCKDHAP12694 DUX4L21-201ENST00000622058 1269 ntBASIC23.55■■□□□ 1.36
BCKDHAP12694 DUX4L10-201ENST00000622460 1267 ntBASIC23.55■■□□□ 1.36
BCKDHAP12694 DUX4L25-201ENST00000624915 1269 ntBASIC23.55■■□□□ 1.36
BCKDHAP12694 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
BCKDHAP12694 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
BCKDHAP12694 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
BCKDHAP12694 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.54■■□□□ 1.36
BCKDHAP12694 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.54■■□□□ 1.36
BCKDHAP12694 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.54■■□□□ 1.36
BCKDHAP12694 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.54■■□□□ 1.36
BCKDHAP12694 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
BCKDHAP12694 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
BCKDHAP12694 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
BCKDHAP12694 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
BCKDHAP12694 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
BCKDHAP12694 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.53■■□□□ 1.36
BCKDHAP12694 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
BCKDHAP12694 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
BCKDHAP12694 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.53■■□□□ 1.36
BCKDHAP12694 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
BCKDHAP12694 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
BCKDHAP12694 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.53■■□□□ 1.36
BCKDHAP12694 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.52■■□□□ 1.36
BCKDHAP12694 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
BCKDHAP12694 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
BCKDHAP12694 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.52■■□□□ 1.36
BCKDHAP12694 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
BCKDHAP12694 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
BCKDHAP12694 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
BCKDHAP12694 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
BCKDHAP12694 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.51■■□□□ 1.35
BCKDHAP12694 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
BCKDHAP12694 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
BCKDHAP12694 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
BCKDHAP12694 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
BCKDHAP12694 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
BCKDHAP12694 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
BCKDHAP12694 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
BCKDHAP12694 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
BCKDHAP12694 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
BCKDHAP12694 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
BCKDHAP12694 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.5■■□□□ 1.35
BCKDHAP12694 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
BCKDHAP12694 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
BCKDHAP12694 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.49■■□□□ 1.35
BCKDHAP12694 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.49■■□□□ 1.35
BCKDHAP12694 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
BCKDHAP12694 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
BCKDHAP12694 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
BCKDHAP12694 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
BCKDHAP12694 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
BCKDHAP12694 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
BCKDHAP12694 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
BCKDHAP12694 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.48■■□□□ 1.35
BCKDHAP12694 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.48■■□□□ 1.35
BCKDHAP12694 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
BCKDHAP12694 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
BCKDHAP12694 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
BCKDHAP12694 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
BCKDHAP12694 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
BCKDHAP12694 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
BCKDHAP12694 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.48■■□□□ 1.35
BCKDHAP12694 DUX4L11-201ENST00000611504 1267 ntBASIC23.48■■□□□ 1.35
BCKDHAP12694 DUX4L12-201ENST00000614593 1267 ntBASIC23.48■■□□□ 1.35
BCKDHAP12694 DUX4L14-201ENST00000621227 1267 ntBASIC23.48■■□□□ 1.35
BCKDHAP12694 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
BCKDHAP12694 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
BCKDHAP12694 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
BCKDHAP12694 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.47■■□□□ 1.35
BCKDHAP12694 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.47■■□□□ 1.35
BCKDHAP12694 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.47■■□□□ 1.35
BCKDHAP12694 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
BCKDHAP12694 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
BCKDHAP12694 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
BCKDHAP12694 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
BCKDHAP12694 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
BCKDHAP12694 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
BCKDHAP12694 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
BCKDHAP12694 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
BCKDHAP12694 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
BCKDHAP12694 AC008813.1-201ENST00000536597 885 ntBASIC23.46■■□□□ 1.35
BCKDHAP12694 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms