Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 DUSP8P4-201ENST00000399538 1761 ntBASIC21.55■■□□□ 1.04
UBCP0CG48 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBCP0CG48 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBCP0CG48 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBCP0CG48 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.54■■□□□ 1.04
UBCP0CG48 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
UBCP0CG48 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.54■■□□□ 1.04
UBCP0CG48 AC021231.2-201ENST00000594613 730 ntBASIC21.54■■□□□ 1.04
UBCP0CG48 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
UBCP0CG48 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBCP0CG48 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.53■■□□□ 1.04
UBCP0CG48 DUX4L29-201ENST00000425409 679 ntBASIC21.53■■□□□ 1.04
UBCP0CG48 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBCP0CG48 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBCP0CG48 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBCP0CG48 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.53■■□□□ 1.04
UBCP0CG48 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBCP0CG48 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.52■■□□□ 1.04
UBCP0CG48 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
UBCP0CG48 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBCP0CG48 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UBCP0CG48 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.51■■□□□ 1.03
UBCP0CG48 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.51■■□□□ 1.03
UBCP0CG48 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBCP0CG48 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.5■■□□□ 1.03
UBCP0CG48 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBCP0CG48 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.5■■□□□ 1.03
UBCP0CG48 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
UBCP0CG48 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
UBCP0CG48 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBCP0CG48 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBCP0CG48 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.49■■□□□ 1.03
UBCP0CG48 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBCP0CG48 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBCP0CG48 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBCP0CG48 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBCP0CG48 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBCP0CG48 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.48■■□□□ 1.03
UBCP0CG48 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBCP0CG48 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.47■■□□□ 1.03
UBCP0CG48 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBCP0CG48 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.47■■□□□ 1.03
UBCP0CG48 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBCP0CG48 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBCP0CG48 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBCP0CG48 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
UBCP0CG48 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBCP0CG48 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBCP0CG48 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.46■■□□□ 1.03
UBCP0CG48 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBCP0CG48 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBCP0CG48 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBCP0CG48 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
UBCP0CG48 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.45■■□□□ 1.03
UBCP0CG48 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBCP0CG48 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBCP0CG48 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBCP0CG48 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
UBCP0CG48 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.45■■□□□ 1.02
UBCP0CG48 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.45■■□□□ 1.02
UBCP0CG48 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBCP0CG48 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBCP0CG48 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBCP0CG48 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBCP0CG48 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
UBCP0CG48 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.44■■□□□ 1.02
UBCP0CG48 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBCP0CG48 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBCP0CG48 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UBCP0CG48 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UBCP0CG48 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBCP0CG48 AC020928.2-201ENST00000588717 2197 ntBASIC21.43■■□□□ 1.02
UBCP0CG48 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.43■■□□□ 1.02
UBCP0CG48 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBCP0CG48 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.43■■□□□ 1.02
UBCP0CG48 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBCP0CG48 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBCP0CG48 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBCP0CG48 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBCP0CG48 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.41■■□□□ 1.02
UBCP0CG48 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBCP0CG48 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBCP0CG48 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBCP0CG48 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.41■■□□□ 1.02
UBCP0CG48 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBCP0CG48 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
UBCP0CG48 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
UBCP0CG48 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBCP0CG48 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBCP0CG48 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBCP0CG48 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBCP0CG48 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBCP0CG48 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
UBCP0CG48 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBCP0CG48 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBCP0CG48 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBCP0CG48 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.39■■□□□ 1.01
UBCP0CG48 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBCP0CG48 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBCP0CG48 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms