Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SOD3P08294 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.32■■□□□ 1
SOD3P08294 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.31■■□□□ 1
SOD3P08294 AC009831.1-201ENST00000580420 1582 ntBASIC21.31■■□□□ 1
SOD3P08294 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SOD3P08294 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SOD3P08294 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.31■■□□□ 1
SOD3P08294 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SOD3P08294 AC133552.2-201ENST00000619106 1032 ntBASIC21.31■■□□□ 1
SOD3P08294 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SOD3P08294 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SOD3P08294 AL592293.1-201ENST00000502889 1188 ntBASIC21.3■■□□□ 1
SOD3P08294 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.3■■□□□ 1
SOD3P08294 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.3■■□□□ 1
SOD3P08294 AC129492.7-201ENST00000622992 756 ntBASIC21.3■■□□□ 1
SOD3P08294 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SOD3P08294 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.29■■□□□ 1
SOD3P08294 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SOD3P08294 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.29■■□□□ 1
SOD3P08294 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SOD3P08294 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
SOD3P08294 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SOD3P08294 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.29■■□□□ 1
SOD3P08294 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SOD3P08294 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SOD3P08294 AP002414.2-202ENST00000590929 1450 ntBASIC21.28■■□□□ 1
SOD3P08294 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.28■■□□□ 1
SOD3P08294 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.28■■□□□ 1
SOD3P08294 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SOD3P08294 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.28■■□□□ 1
SOD3P08294 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOD3P08294 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SOD3P08294 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SOD3P08294 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOD3P08294 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.27■■□□□ 1
SOD3P08294 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.27■■□□□ 1
SOD3P08294 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.26■□□□□ 0.99
SOD3P08294 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SOD3P08294 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOD3P08294 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SOD3P08294 AC025884.2-201ENST00000553429 711 ntBASIC21.26■□□□□ 0.99
SOD3P08294 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOD3P08294 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOD3P08294 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.25■□□□□ 0.99
SOD3P08294 DUX4L18-201ENST00000553347 1267 ntBASIC21.25■□□□□ 0.99
SOD3P08294 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SOD3P08294 AC026202.3-201ENST00000600805 1127 ntBASIC21.25■□□□□ 0.99
SOD3P08294 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOD3P08294 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SOD3P08294 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SOD3P08294 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOD3P08294 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOD3P08294 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOD3P08294 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SOD3P08294 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.24■□□□□ 0.99
SOD3P08294 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SOD3P08294 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SOD3P08294 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOD3P08294 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOD3P08294 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SOD3P08294 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOD3P08294 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.22■□□□□ 0.99
SOD3P08294 RARRES2P1-201ENST00000474487 481 ntBASIC21.22■□□□□ 0.99
SOD3P08294 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOD3P08294 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOD3P08294 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.21■□□□□ 0.99
SOD3P08294 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOD3P08294 RP9P-202ENST00000450133 1212 ntBASIC21.21■□□□□ 0.99
SOD3P08294 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.21■□□□□ 0.99
SOD3P08294 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.21■□□□□ 0.99
SOD3P08294 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.2■□□□□ 0.98
SOD3P08294 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.2■□□□□ 0.98
SOD3P08294 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOD3P08294 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOD3P08294 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SOD3P08294 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOD3P08294 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOD3P08294 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOD3P08294 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOD3P08294 AC093536.1-201ENST00000569153 554 ntBASIC21.19■□□□□ 0.98
SOD3P08294 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.19■□□□□ 0.98
SOD3P08294 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.19■□□□□ 0.98
SOD3P08294 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOD3P08294 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOD3P08294 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
SOD3P08294 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SOD3P08294 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOD3P08294 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOD3P08294 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOD3P08294 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOD3P08294 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
SOD3P08294 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.17■□□□□ 0.98
SOD3P08294 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.17■□□□□ 0.98
SOD3P08294 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.17■□□□□ 0.98
SOD3P08294 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SOD3P08294 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SOD3P08294 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.16■□□□□ 0.98
SOD3P08294 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SOD3P08294 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SOD3P08294 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms