Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RARRES2P1-201ENST00000474487 481 ntBASIC30.26■■■□□ 2.44
COL1A1P02452 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
COL1A1P02452 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.26■■■□□ 2.43
COL1A1P02452 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
COL1A1P02452 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
COL1A1P02452 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.25■■■□□ 2.43
COL1A1P02452 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
COL1A1P02452 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL1A1P02452 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL1A1P02452 AC009831.1-201ENST00000580420 1582 ntBASIC30.24■■■□□ 2.43
COL1A1P02452 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.23■■■□□ 2.43
COL1A1P02452 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.23■■■□□ 2.43
COL1A1P02452 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.23■■■□□ 2.43
COL1A1P02452 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
COL1A1P02452 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
COL1A1P02452 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.23■■■□□ 2.43
COL1A1P02452 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.22■■■□□ 2.43
COL1A1P02452 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
COL1A1P02452 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
COL1A1P02452 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
COL1A1P02452 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
COL1A1P02452 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL1A1P02452 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.19■■■□□ 2.42
COL1A1P02452 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL1A1P02452 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.19■■■□□ 2.42
COL1A1P02452 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.19■■■□□ 2.42
COL1A1P02452 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC30.19■■■□□ 2.42
COL1A1P02452 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL1A1P02452 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL1A1P02452 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL1A1P02452 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.18■■■□□ 2.42
COL1A1P02452 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL1A1P02452 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
COL1A1P02452 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
COL1A1P02452 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL1A1P02452 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.16■■■□□ 2.42
COL1A1P02452 SMPD5-203ENST00000639008 1464 ntBASIC30.16■■■□□ 2.42
COL1A1P02452 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL1A1P02452 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL1A1P02452 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL1A1P02452 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC30.16■■■□□ 2.42
COL1A1P02452 AL592293.1-201ENST00000502889 1188 ntBASIC30.15■■■□□ 2.42
COL1A1P02452 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC30.15■■■□□ 2.42
COL1A1P02452 AC129492.7-201ENST00000622992 756 ntBASIC30.15■■■□□ 2.42
COL1A1P02452 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
COL1A1P02452 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC30.14■■■□□ 2.42
COL1A1P02452 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.13■■■□□ 2.41
COL1A1P02452 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL1A1P02452 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL1A1P02452 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL1A1P02452 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL1A1P02452 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL1A1P02452 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL1A1P02452 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.12■■■□□ 2.41
COL1A1P02452 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL1A1P02452 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
COL1A1P02452 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL1A1P02452 AC026202.3-201ENST00000600805 1127 ntBASIC30.12■■■□□ 2.41
COL1A1P02452 WHAMMP3-201ENST00000611636 1609 ntBASIC30.11■■■□□ 2.41
COL1A1P02452 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL1A1P02452 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
COL1A1P02452 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
COL1A1P02452 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
COL1A1P02452 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
COL1A1P02452 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC30.1■■■□□ 2.41
COL1A1P02452 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC30.1■■■□□ 2.41
COL1A1P02452 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
COL1A1P02452 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
COL1A1P02452 AC093536.1-201ENST00000569153 554 ntBASIC30.09■■■□□ 2.41
COL1A1P02452 RAP2CP1-202ENST00000605179 643 ntBASIC30.09■■■□□ 2.41
COL1A1P02452 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
COL1A1P02452 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
COL1A1P02452 AC133552.2-201ENST00000619106 1032 ntBASIC30.07■■■□□ 2.4
COL1A1P02452 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
COL1A1P02452 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
COL1A1P02452 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
COL1A1P02452 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
COL1A1P02452 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
COL1A1P02452 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
COL1A1P02452 AL359504.2-201ENST00000605506 1601 ntBASIC30.05■■■□□ 2.4
COL1A1P02452 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
COL1A1P02452 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
COL1A1P02452 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
COL1A1P02452 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC30.05■■■□□ 2.4
COL1A1P02452 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
COL1A1P02452 RP9P-202ENST00000450133 1212 ntBASIC30.05■■■□□ 2.4
COL1A1P02452 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.05■■■□□ 2.4
COL1A1P02452 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
COL1A1P02452 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.04■■■□□ 2.4
COL1A1P02452 HES4-204ENST00000484667 667 ntTSL 3 BASIC30.04■■■□□ 2.4
COL1A1P02452 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC30.03■■■□□ 2.4
COL1A1P02452 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
COL1A1P02452 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.03■■■□□ 2.4
COL1A1P02452 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL1A1P02452 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL1A1P02452 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
COL1A1P02452 SPCS2P3-201ENST00000500401 656 ntBASIC30.02■■■□□ 2.4
COL1A1P02452 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
COL1A1P02452 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
COL1A1P02452 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms