Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IFNA1P01562 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.5■□□□□ 0.71
IFNA1P01562 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IFNA1P01562 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IFNA1P01562 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IFNA1P01562 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IFNA1P01562 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.5■□□□□ 0.71
IFNA1P01562 AC018358.1-201ENST00000631079 1402 ntBASIC19.5■□□□□ 0.71
IFNA1P01562 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IFNA1P01562 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IFNA1P01562 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
IFNA1P01562 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
IFNA1P01562 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IFNA1P01562 DYNLL1-208ENST00000550178 581 ntBASIC19.49■□□□□ 0.71
IFNA1P01562 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
IFNA1P01562 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
IFNA1P01562 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.48■□□□□ 0.71
IFNA1P01562 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFNA1P01562 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFNA1P01562 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IFNA1P01562 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFNA1P01562 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFNA1P01562 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.48■□□□□ 0.71
IFNA1P01562 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.47■□□□□ 0.71
IFNA1P01562 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.47■□□□□ 0.71
IFNA1P01562 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.47■□□□□ 0.71
IFNA1P01562 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFNA1P01562 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IFNA1P01562 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
IFNA1P01562 ERN1-208ENST00000606895 2068 ntBASIC19.47■□□□□ 0.71
IFNA1P01562 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFNA1P01562 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IFNA1P01562 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFNA1P01562 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.46■□□□□ 0.71
IFNA1P01562 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
IFNA1P01562 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IFNA1P01562 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IFNA1P01562 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IFNA1P01562 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IFNA1P01562 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IFNA1P01562 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IFNA1P01562 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
IFNA1P01562 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.43■□□□□ 0.7
IFNA1P01562 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IFNA1P01562 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
IFNA1P01562 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IFNA1P01562 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IFNA1P01562 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IFNA1P01562 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
IFNA1P01562 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.43■□□□□ 0.7
IFNA1P01562 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IFNA1P01562 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNA1P01562 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IFNA1P01562 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
IFNA1P01562 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.42■□□□□ 0.7
IFNA1P01562 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNA1P01562 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNA1P01562 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNA1P01562 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNA1P01562 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNA1P01562 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFNA1P01562 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IFNA1P01562 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNA1P01562 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNA1P01562 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNA1P01562 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFNA1P01562 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
IFNA1P01562 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFNA1P01562 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFNA1P01562 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFNA1P01562 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IFNA1P01562 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFNA1P01562 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
IFNA1P01562 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
IFNA1P01562 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
IFNA1P01562 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
IFNA1P01562 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
IFNA1P01562 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFNA1P01562 AC142381.3-201ENST00000568208 1670 ntBASIC19.37■□□□□ 0.69
IFNA1P01562 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFNA1P01562 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFNA1P01562 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFNA1P01562 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFNA1P01562 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFNA1P01562 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
IFNA1P01562 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFNA1P01562 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFNA1P01562 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IFNA1P01562 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
IFNA1P01562 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFNA1P01562 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.36■□□□□ 0.69
IFNA1P01562 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.35■□□□□ 0.69
IFNA1P01562 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFNA1P01562 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFNA1P01562 AC012676.1-201ENST00000574705 1949 ntBASIC19.35■□□□□ 0.69
IFNA1P01562 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFNA1P01562 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFNA1P01562 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFNA1P01562 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFNA1P01562 AL031258.1-201ENST00000623562 325 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms