Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.61■■□□□ 1.53
SOD1P00441 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.6■■□□□ 1.53
SOD1P00441 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SOD1P00441 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
SOD1P00441 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.6■■□□□ 1.53
SOD1P00441 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.6■■□□□ 1.53
SOD1P00441 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SOD1P00441 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
SOD1P00441 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SOD1P00441 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.59■■□□□ 1.53
SOD1P00441 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SOD1P00441 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SOD1P00441 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SOD1P00441 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.53
SOD1P00441 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.58■■□□□ 1.53
SOD1P00441 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SOD1P00441 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SOD1P00441 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SOD1P00441 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.57■■□□□ 1.52
SOD1P00441 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.57■■□□□ 1.52
SOD1P00441 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SOD1P00441 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SOD1P00441 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SOD1P00441 AL449106.1-201ENST00000608517 1980 ntBASIC24.55■■□□□ 1.52
SOD1P00441 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SOD1P00441 ABHD17AP5-201ENST00000580133 923 ntBASIC24.54■■□□□ 1.52
SOD1P00441 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SOD1P00441 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.53■■□□□ 1.52
SOD1P00441 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SOD1P00441 AC025884.2-201ENST00000553429 711 ntBASIC24.52■■□□□ 1.52
SOD1P00441 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.52■■□□□ 1.52
SOD1P00441 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.51■■□□□ 1.51
SOD1P00441 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SOD1P00441 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SOD1P00441 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SOD1P00441 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
SOD1P00441 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SOD1P00441 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SOD1P00441 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SOD1P00441 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.5■■□□□ 1.51
SOD1P00441 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.49■■□□□ 1.51
SOD1P00441 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
SOD1P00441 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SOD1P00441 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SOD1P00441 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.49■■□□□ 1.51
SOD1P00441 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SOD1P00441 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.49■■□□□ 1.51
SOD1P00441 AL359504.2-201ENST00000605506 1601 ntBASIC24.49■■□□□ 1.51
SOD1P00441 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SOD1P00441 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.48■■□□□ 1.51
SOD1P00441 SMPD5-203ENST00000639008 1464 ntBASIC24.48■■□□□ 1.51
SOD1P00441 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SOD1P00441 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SOD1P00441 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.47■■□□□ 1.51
SOD1P00441 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SOD1P00441 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.47■■□□□ 1.51
SOD1P00441 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SOD1P00441 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SOD1P00441 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
SOD1P00441 AC007029.1-201ENST00000604183 313 ntBASIC24.47■■□□□ 1.51
SOD1P00441 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SOD1P00441 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SOD1P00441 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SOD1P00441 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
SOD1P00441 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
SOD1P00441 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.45■■□□□ 1.5
SOD1P00441 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SOD1P00441 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SOD1P00441 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SOD1P00441 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.44■■□□□ 1.5
SOD1P00441 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SOD1P00441 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.44■■□□□ 1.5
SOD1P00441 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.44■■□□□ 1.5
SOD1P00441 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SOD1P00441 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.43■■□□□ 1.5
SOD1P00441 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SOD1P00441 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.43■■□□□ 1.5
SOD1P00441 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.43■■□□□ 1.5
SOD1P00441 U85056.1-201ENST00000616429 682 ntBASIC24.42■■□□□ 1.5
SOD1P00441 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SOD1P00441 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SOD1P00441 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SOD1P00441 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SOD1P00441 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SOD1P00441 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SOD1P00441 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SOD1P00441 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SOD1P00441 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
SOD1P00441 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.39■■□□□ 1.5
SOD1P00441 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SOD1P00441 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.39■■□□□ 1.49
SOD1P00441 NTF6A-201ENST00000591175 560 ntBASIC24.39■■□□□ 1.49
SOD1P00441 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
SOD1P00441 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.39■■□□□ 1.49
SOD1P00441 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SOD1P00441 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SOD1P00441 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SOD1P00441 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SOD1P00441 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SOD1P00441 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms