Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDCD6O75340 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
PDCD6O75340 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDCD6O75340 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.8■□□□□ 0.92
PDCD6O75340 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDCD6O75340 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDCD6O75340 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.79■□□□□ 0.92
PDCD6O75340 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.79■□□□□ 0.92
PDCD6O75340 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDCD6O75340 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.78■□□□□ 0.92
PDCD6O75340 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDCD6O75340 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDCD6O75340 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDCD6O75340 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDCD6O75340 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDCD6O75340 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD6O75340 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD6O75340 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD6O75340 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.77■□□□□ 0.92
PDCD6O75340 AC135731.1-201ENST00000569415 2548 ntBASIC20.77■□□□□ 0.92
PDCD6O75340 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD6O75340 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD6O75340 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD6O75340 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.76■□□□□ 0.91
PDCD6O75340 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PDCD6O75340 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.76■□□□□ 0.91
PDCD6O75340 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.76■□□□□ 0.91
PDCD6O75340 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.75■□□□□ 0.91
PDCD6O75340 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDCD6O75340 AC020928.2-201ENST00000588717 2197 ntBASIC20.75■□□□□ 0.91
PDCD6O75340 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDCD6O75340 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDCD6O75340 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.75■□□□□ 0.91
PDCD6O75340 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDCD6O75340 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PDCD6O75340 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PDCD6O75340 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD6O75340 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD6O75340 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD6O75340 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD6O75340 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.74■□□□□ 0.91
PDCD6O75340 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD6O75340 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PDCD6O75340 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD6O75340 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD6O75340 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.73■□□□□ 0.91
PDCD6O75340 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD6O75340 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD6O75340 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD6O75340 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD6O75340 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD6O75340 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD6O75340 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD6O75340 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PDCD6O75340 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.72■□□□□ 0.91
PDCD6O75340 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.72■□□□□ 0.91
PDCD6O75340 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD6O75340 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD6O75340 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
PDCD6O75340 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDCD6O75340 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDCD6O75340 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDCD6O75340 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.71■□□□□ 0.91
PDCD6O75340 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDCD6O75340 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDCD6O75340 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
PDCD6O75340 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDCD6O75340 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.71■□□□□ 0.91
PDCD6O75340 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PDCD6O75340 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD6O75340 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD6O75340 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PDCD6O75340 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD6O75340 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD6O75340 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.7■□□□□ 0.9
PDCD6O75340 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.7■□□□□ 0.9
PDCD6O75340 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.69■□□□□ 0.9
PDCD6O75340 LINC01971-201ENST00000617888 1048 ntBASIC20.69■□□□□ 0.9
PDCD6O75340 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PDCD6O75340 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD6O75340 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.69■□□□□ 0.9
PDCD6O75340 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD6O75340 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.68■□□□□ 0.9
PDCD6O75340 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDCD6O75340 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PDCD6O75340 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDCD6O75340 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.68■□□□□ 0.9
PDCD6O75340 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PDCD6O75340 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDCD6O75340 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDCD6O75340 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDCD6O75340 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.67■□□□□ 0.9
PDCD6O75340 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD6O75340 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
PDCD6O75340 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PDCD6O75340 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.67■□□□□ 0.9
PDCD6O75340 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD6O75340 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD6O75340 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD6O75340 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms