Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 ST3GAL6-206ENST00000466482 540 ntTSL 424.56■■□□□ 1.521e-6■■□□□ 13.3
EIF3DO15371 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.491e-6■■□□□ 13.3
EIF3DO15371 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.221e-6■■□□□ 13.3
EIF3DO15371 ST3GAL6-227ENST00000497621 2109 ntTSL 1 (best)21.74■■□□□ 1.071e-6■■□□□ 13.3
EIF3DO15371 FLOT2-208ENST00000582174 703 ntTSL 321.72■■□□□ 1.071e-9■■□□□ 13.3
EIF3DO15371 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.24■□□□□ 0.991e-6■■□□□ 13.3
EIF3DO15371 ST3GAL6-203ENST00000460774 582 ntTSL 321.22■□□□□ 0.991e-6■■□□□ 13.3
EIF3DO15371 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.981e-6■■□□□ 13.3
EIF3DO15371 EEF1A1-205ENST00000455918 701 ntTSL 220.97■□□□□ 0.951e-6■■□□□ 13.3
EIF3DO15371 FLOT2-212ENST00000593158 752 ntTSL 520.73■□□□□ 0.911e-9■■□□□ 13.3
EIF3DO15371 LMNB1-204ENST00000463908 557 ntTSL 420.72■□□□□ 0.911e-6■■□□□ 13.3
EIF3DO15371 ST3GAL6-204ENST00000462152 1102 ntTSL 220.34■□□□□ 0.851e-6■■□□□ 13.3
EIF3DO15371 ST3GAL6-226ENST00000497008 564 ntTSL 420.26■□□□□ 0.831e-6■■□□□ 13.3
EIF3DO15371 ST3GAL6-219ENST00000489112 804 ntTSL 319.6■□□□□ 0.731e-6■■□□□ 13.3
EIF3DO15371 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.711e-9■■□□□ 13.3
EIF3DO15371 ST3GAL6-213ENST00000480133 360 ntTSL 419.32■□□□□ 0.681e-6■■□□□ 13.3
EIF3DO15371 LMNB1-206ENST00000492190 738 ntTSL 319.29■□□□□ 0.681e-6■■□□□ 13.3
EIF3DO15371 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.51e-6■■□□□ 13.3
EIF3DO15371 FLOT2-204ENST00000577789 2503 ntTSL 517.91■□□□□ 0.461e-9■■□□□ 13.3
EIF3DO15371 FLOT2-206ENST00000580805 2679 ntTSL 517.84■□□□□ 0.451e-9■■□□□ 13.3
EIF3DO15371 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.98■□□□□ 0.311e-9■■□□□ 13.3
EIF3DO15371 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.31e-6■■□□□ 13.3
EIF3DO15371 LMNB1-203ENST00000460265 3475 ntTSL 1 (best)16.56■□□□□ 0.241e-6■■□□□ 13.3
EIF3DO15371 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.171e-6■■□□□ 13.3
EIF3DO15371 LRP5-206ENST00000529993 5103 ntTSL 1 (best)15.89■□□□□ 0.131e-6■■□□□ 13.3
EIF3DO15371 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.131e-6■■□□□ 13.3
EIF3DO15371 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.091e-9■■□□□ 13.3
EIF3DO15371 BUB1-206ENST00000465029 1999 ntTSL 214.55□□□□□ -0.081e-6■■□□□ 13.3
EIF3DO15371 ST3GAL6-208ENST00000469105 2837 ntTSL 1 (best)13.68□□□□□ -0.221e-6■■□□□ 13.3
EIF3DO15371 USP1-203ENST00000442679 502 ntTSL 213.47□□□□□ -0.253e-12■■□□□ 13.3
EIF3DO15371 BUB1-203ENST00000420328 566 ntTSL 513.33□□□□□ -0.281e-6■■□□□ 13.3
EIF3DO15371 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.281e-6■■□□□ 13.3
EIF3DO15371 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC13.05□□□□□ -0.321e-6■■□□□ 13.3
EIF3DO15371 FLOT2-211ENST00000586827 1069 ntTSL 512.77□□□□□ -0.371e-9■■□□□ 13.3
EIF3DO15371 DIAPH3-205ENST00000400324 4804 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.371e-6■■□□□ 13.3
EIF3DO15371 ST3GAL6-217ENST00000486249 3148 ntTSL 212.72□□□□□ -0.371e-6■■□□□ 13.3
EIF3DO15371 USP1-201ENST00000339950 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.383e-12■■□□□ 13.3
EIF3DO15371 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.421e-6■■□□□ 13.3
EIF3DO15371 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.461e-6■■□□□ 13.3
EIF3DO15371 HIRA-203ENST00000452818 453 ntTSL 511.84□□□□□ -0.511e-6■■□□□ 13.3
EIF3DO15371 USP1-204ENST00000452143 893 ntTSL 311.64□□□□□ -0.553e-12■■□□□ 13.3
EIF3DO15371 BUB1-201ENST00000302759 3507 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.681e-6■■□□□ 13.3
EIF3DO15371 ST3GAL6-201ENST00000265261 3362 ntTSL 2 BASIC10.68□□□□□ -0.71e-6■■□□□ 13.3
EIF3DO15371 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.771e-6■■□□□ 13.3
EIF3DO15371 DIAPH3-203ENST00000400319 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.781e-6■■□□□ 13.3
EIF3DO15371 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.811e-6■■□□□ 13.3
EIF3DO15371 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC9.96□□□□□ -0.811e-6■■□□□ 13.3
EIF3DO15371 EEF1A1-204ENST00000356303 635 ntTSL 29.49□□□□□ -0.891e-6■■□□□ 13.3
EIF3DO15371 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.971e-6■■□□□ 13.3
EIF3DO15371 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.83□□□□□ -1.161e-6■■□□□ 13.3
EIF3DO15371 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.233e-12■■□□□ 13.3
EIF3DO15371 BUB1-205ENST00000447014 551 ntTSL 47.27□□□□□ -1.251e-6■■□□□ 13.3
EIF3DO15371 BUB1-207ENST00000466333 2501 ntTSL 1 (best)6.31□□□□□ -1.41e-6■■□□□ 13.3
EIF3DO15371 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.85□□□□□ -1.471e-6■■□□□ 13.3
EIF3DO15371 LMNB1-208ENST00000504788 1801 ntTSL 25.44□□□□□ -1.541e-6■■□□□ 13.3
EIF3DO15371 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.97□□□□□ -1.611e-6■■□□□ 13.3
EIF3DO15371 ST3GAL6-218ENST00000486334 750 ntTSL 54.13□□□□□ -1.751e-6■■□□□ 13.3
EIF3DO15371 LMNB1-205ENST00000472034 730 ntTSL 34.1□□□□□ -1.751e-6■■□□□ 13.3
EIF3DO15371 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.692e-6■■□□□ 13.3
EIF3DO15371 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.2□□□□□ -1.92e-6■■□□□ 13.3
EIF3DO15371 ANKHD1-210ENST00000432301 3234 ntTSL 1 (best)8.31□□□□□ -1.083e-6■■□□□ 13.3
EIF3DO15371 ANKHD1-212ENST00000435794 3511 ntTSL 58.09□□□□□ -1.113e-6■■□□□ 13.3
EIF3DO15371 ANKHD1-209ENST00000431508 4079 ntTSL 26.79□□□□□ -1.323e-6■■□□□ 13.3
EIF3DO15371 ANKHD1-211ENST00000433049 3649 ntTSL 56.28□□□□□ -1.43e-6■■□□□ 13.3
EIF3DO15371 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC13.98□□□□□ -0.172e-6■■□□□ 13.3
EIF3DO15371 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.252e-6■■□□□ 13.3
EIF3DO15371 ITPR2-207ENST00000540791 575 ntTSL 35□□□□□ -1.616e-10■■□□□ 13.3
EIF3DO15371 TRIO-221ENST00000513206 7995 ntTSL 516.82■□□□□ 0.284e-7■■□□□ 13.2
EIF3DO15371 TRIO-218ENST00000512070 8907 ntTSL 215.87■□□□□ 0.134e-7■■□□□ 13.2
EIF3DO15371 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.174e-7■■□□□ 13.2
EIF3DO15371 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC9.92□□□□□ -0.824e-7■■□□□ 13.2
EIF3DO15371 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.371e-6■■□□□ 13.2
EIF3DO15371 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.33■□□□□ 0.21e-6■■□□□ 13.2
EIF3DO15371 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC12.76□□□□□ -0.371e-6■■□□□ 13.2
EIF3DO15371 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.759e-16■■□□□ 13.2
EIF3DO15371 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.93■□□□□ 0.462e-6■■□□□ 13.2
EIF3DO15371 C2orf48-202ENST00000619640 480 ntTSL 1 (best)16.79■□□□□ 0.282e-6■■□□□ 13.2
EIF3DO15371 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.07■□□□□ 0.162e-6■■□□□ 13.2
EIF3DO15371 APEX1-204ENST00000553368 304 ntTSL 316.05■□□□□ 0.165e-15■■□□□ 13.2
EIF3DO15371 APEX1-205ENST00000553555 1603 ntTSL 1 (best)15.17■□□□□ 0.025e-15■■□□□ 13.2
EIF3DO15371 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.045e-15■■□□□ 13.2
EIF3DO15371 APEX1-208ENST00000554813 654 ntTSL 314.39□□□□□ -0.115e-15■■□□□ 13.2
EIF3DO15371 APEX1-211ENST00000555839 952 ntTSL 214.39□□□□□ -0.115e-15■■□□□ 13.2
EIF3DO15371 APEX1-217ENST00000557181 566 ntTSL 313.93□□□□□ -0.185e-15■■□□□ 13.2
EIF3DO15371 APEX1-207ENST00000554325 568 ntTSL 513.93□□□□□ -0.185e-15■■□□□ 13.2
EIF3DO15371 APEX1-213ENST00000556296 571 ntTSL 413.84□□□□□ -0.195e-15■■□□□ 13.2
EIF3DO15371 APEX1-215ENST00000557150 740 ntTSL 313.51□□□□□ -0.255e-15■■□□□ 13.2
EIF3DO15371 APEX1-216ENST00000557159 1803 ntTSL 213.43□□□□□ -0.265e-15■■□□□ 13.2
EIF3DO15371 APEX1-219ENST00000557365 831 ntTSL 313.26□□□□□ -0.295e-15■■□□□ 13.2
EIF3DO15371 APEX1-212ENST00000556054 773 ntTSL 313.26□□□□□ -0.295e-15■■□□□ 13.2
EIF3DO15371 APEX1-209ENST00000555306 898 ntTSL 513.26□□□□□ -0.295e-15■■□□□ 13.2
EIF3DO15371 APEX1-202ENST00000398030 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.365e-15■■□□□ 13.2
EIF3DO15371 APEX1-210ENST00000555414 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.365e-15■■□□□ 13.2
EIF3DO15371 APEX1-220ENST00000557592 640 ntTSL 512.44□□□□□ -0.425e-15■■□□□ 13.2
EIF3DO15371 APEX1-206ENST00000553681 899 ntTSL 311.89□□□□□ -0.515e-15■■□□□ 13.2
EIF3DO15371 APEX1-218ENST00000557344 671 ntTSL 210.82□□□□□ -0.685e-15■■□□□ 13.2
EIF3DO15371 APEX1-214ENST00000557054 888 ntTSL 5 BASIC8.35□□□□□ -1.075e-15■■□□□ 13.2
EIF3DO15371 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.912e-6■■□□□ 13.1
EIF3DO15371 SEPT9-210ENST00000585929 906 ntTSL 416.47■□□□□ 0.232e-6■■□□□ 13.1
EIF3DO15371 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.91■□□□□ 0.142e-6■■□□□ 13.1
Retrieved 100 of 4,069 protein–RNA pairs in 56.2 ms